Burkholderiales bacterium GJ-E10: E1O_07200
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Entry
E1O_07200 CDS
T03654
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbag
Burkholderiales bacterium GJ-E10
Pathway
bbag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1O_07200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbag03019
]
E1O_07200
03016 Transfer RNA biogenesis [BR:
bbag03016
]
E1O_07200
Enzymes [BR:
bbag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E1O_07200
Messenger RNA biogenesis [BR:
bbag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E1O_07200
Transfer RNA biogenesis [BR:
bbag03016
]
Prokaryotic type
tRNA degradation factors
E1O_07200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
WCX
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
S1_RRP5
DUF5813
Motif
Other DBs
NCBI-ProteinID:
BAP87851
LinkDB
All DBs
Position
760387..762504
Genome browser
AA seq
705 aa
AA seq
DB search
MFDKVTKTFQYGKHTVRLETGEIARQATGAVMAWVGDTVVLATVVAANQAKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPDGFFNEVQVVIHVVSV
DPEIDPDIPAMIGTSAALAISGIPFNGPIGAARVGYIDGQYVLNPSAAELKQSRLDLVVA
GTERAVLMVESEADQLPEDVMLGAVMYGHEQMQAVINAIHDLVAEAGKPVWDWQAPARNE
ALHARLEELAGPGYREAYQIRSKQARSQKLKEVESAVRAKLAEDAAAAGTTVDERAVDGI
LFDMQAKIVRNQILAGEPRIDGRDTRTVRPIEIRLGVLPRTHGSALFTRGETQALVVATL
GTKQDEQIIDALQGEYRDRFMLHYNMPPFATGECGRVGTPKRREVGHGRLAKRALVAVLP
APEEFQYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLIKEGGRFA
VLTDILGDEDHLGDMDFKVAGTSTGVTALQMDIKIEGITKEIMQVALAQAREGRTHILGK
MHDAITVSRGELSEFAPRMIRLKINPEKIRDVIGKGGAVIRALTEETGTQIDIEDDGSIT
IASVDLERGREAERRILELTAEVEVGKVYDGTVLRLLDFGAIVQLLPGRDGLLHISQIAN
ERVNQVSDYLKEGQVVKVKVIEADEKGRVRLSMKAAGTEGAAPAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacaaagtgaccaagacgttccagtacggcaagcacacggttcgactggaaacc
ggagagatcgcacgccaggccaccggtgcggtgatggcgtgggtgggtgatacggtcgtg
ctggcgacggtggtcgcggccaaccaggccaagcccggtcaggatttcttcccgctgacg
gtggattacatcgagaagacctatgccgcgggcaagatccccggcggattcttcaagcgc
gaaggccgtccctccgaaaaggagacgctgacctcgcggctgatcgaccggccgatccgt
cctctgttcccggacggcttcttcaatgaagtgcaggtcgtcatccacgtcgtgtccgtc
gatcccgagatcgaccccgacatccccgcgatgatcggcacctcggcggccctggcgatt
tccgggattccgttcaacgggccgatcggcgccgcgcgcgtcggctacatcgacggccag
tacgtgctcaatcccagcgccgcggaactgaagcagtcgcgcctggatctcgtcgtcgcc
ggtaccgagcgcgccgtgctgatggtcgagtccgaggccgaccagctgccggaagatgtg
atgctgggcgccgtgatgtacggccatgagcagatgcaggcggtgatcaacgcgatccac
gacctcgtcgccgaggcgggcaagcccgtctgggattggcaggcgccggcgcgcaacgag
gcgctgcatgcccgcctcgaggaattggccgggccggggtaccgcgaggcctatcagatc
cgcagcaagcaggcccgttcgcagaagctcaaggaagtggaatcggcggtgcgcgccaag
cttgcggaagacgccgcggccgccggaacgacggtcgacgaacgtgcggtcgacgggatc
ctcttcgacatgcaggcgaagatcgttcgcaaccagatcctggcgggcgagccgcggatc
gacgggcgcgacacgcgcacggtccgtcccatcgaaatccgcctgggcgtgctgccgcgc
acccacggttcggcgctgttcacccgcggggagacgcaggcgctggtcgtcgccaccctg
ggaaccaagcaggacgagcagatcatcgatgcgctgcagggcgagtatcgcgatcgcttc
atgctgcactacaacatgccgccgttcgcgaccggcgaatgcggccgcgtcggcacgccc
aagcggcgggaagtcggccacggccggctcgccaagcgtgccctggtggcggtgctgccg
gcgccggaagaattccaatactcgatccgggtcgtctcggagatcaccgaatccaacggc
tcctcgtcgatggcttcggtctgcggcggctgcttggcattgatggacgcaggcgttccc
gtcaaggcgcacgttgcgggcgtcgcgatgggcctcatcaaggagggcgggcgcttcgcg
gtgctgaccgacatcctgggcgacgaggatcatctcggcgacatggacttcaaggtggcc
ggtaccagtaccggcgtgaccgccctgcagatggacatcaagatcgagggcatcaccaag
gagatcatgcaggtcgccctggcgcaggcgcgcgaaggccgcacgcacatcctcggcaag
atgcatgatgcgatcaccgtgtcgcgcggcgaattgtccgaattcgccccccgcatgatc
cggctcaagatcaatcccgagaagatccgcgacgtgatcggcaaggggggggcggtgatc
cgagcgctgaccgaggaaaccggcacccagatcgacatcgaagacgatggttcgatcacg
atcgccagcgtcgacctcgagcggggtcgcgaggccgagcgccggatcctggagttgacg
gccgaggtcgaagtcggcaaggtctacgacggtacggtgctgcgcctgctcgatttcggc
gcgatcgtccagttgctgccgggccgcgacgggctgttgcacatctcccagatcgccaac
gagcgcgtgaaccaggtcagcgactatctcaaggaaggccaggtcgtgaaggtcaaggtc
atcgaagccgacgagaagggtcgtgtccgcctgtcgatgaaggcggccggaacggaaggg
gccgcgcccgcggcgtaa
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integrated database retrieval system
