Burkholderiales bacterium GJ-E10: E1O_25300
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Entry
E1O_25300 CDS
T03654
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bbag
Burkholderiales bacterium GJ-E10
Pathway
bbag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E1O_25300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbag03021
]
E1O_25300
03400 DNA repair and recombination proteins [BR:
bbag03400
]
E1O_25300
Enzymes [BR:
bbag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E1O_25300
Transcription machinery [BR:
bbag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E1O_25300
DNA repair and recombination proteins [BR:
bbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E1O_25300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
RPOC_hybrid
DUF7513
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
BAP89661
UniProt:
A0A0A1H5T1
LinkDB
All DBs
Position
complement(2696386..2700639)
Genome browser
AA seq
1417 aa
AA seq
DB search
MKALLDLFKQVHQEEQFDVIKIGIASPDKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRMGMVLDMTLRDIERVLYFEAYVVVDPGFTPLKRGQLMTEDDFIAKTEEFGDEFRALM
GAEAVRELLSSIDVDKEIERLRKELSETGSEAKIKKYAKRLKTLEGFQRSGIKPDWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKMVDSQEPIVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RALMLASNNVLFPSNGDPSIVPSQDVVLGLYYATRERINGRGEGMHFIDVAEAQLALDAG
QVELQTRVTVRIREYDVDRETGERTEKITRYETTVGRAILSEILPPGLPFSVMNKPLKKK
EISRLINAAFRRCGLRETVIFADRLLQSGFRLATRGGLSIAIGDMHVPAQKEEIIRGAEK
EVKEIEAQYTSGLITQGERYNKVVDIWGRAGDHVGKVMMEQLAVERTANRHGTEVTQESF
NSIFMMADSGARGSVAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVTHDDCGTVNGVAMRALVEGGEVIEALRDRI
LGRVAAADVINPETQDVLYPAGTLMDEDAVDRVEELGIDEVKVRTPLSCETRYGICAKCY
GRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVQSSIEAKSNGTVR
FTATMRYVTNAKGELVVISRSGEVLVADDNGRERERHKVPYGATLNVTDGKAVKAGTQLA
QWDPMTRPIVTEYGGTVRFENVEEGVTVAKQIDEVTGLSTLVVIDAKRRGSSSKGVRPQV
KLIGDDNQEVKIHGTDHAVTISFPVGALIVVRDGQTVGVGEVLARIPQESQKTRDITGGL
PRVAELFEARSPKDAGMLAEVTGTTSFGKDTKGKQRLIITDMDGKEHEFLIPKDKHVLVH
DGQVVNKGESIVDGPADPHDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVQITDAGDTAFIPGEQVERSEMLDENDAVIAKGGRPAMYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGSGLAYHRARKEKEEIEAAE
RQALAELEAQEREEQARALAAADHDTEPGSEGGAESV
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctattggatctgttcaagcaggtacatcaggaagaacagttcgacgtcatc
aagatcggtatcgcgtcgcccgacaagatccggtcgtggtcctacggtgaggtcaagaag
ccggagaccatcaactatcggacgttcaagcccgagcgcgacggcctgttctgcgccaag
attttcggcccgatcaaggactacgagtgcttgtgcggaaagtacaagcgcctcaagcat
cgcggcgtgatctgcgagaagtgcggcgtcgaggtgacgctcgccaaggttcgccgcgag
cgcatgggccacatcgaactggcctcgccggtcgcgcacatctggttcctcaagtccctg
cccagccgcatgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgttgtat
ttcgaggcctacgtcgtggtcgacccgggcttcacgccgctcaagcgcggccagctcatg
accgaggacgacttcatcgccaagaccgaggagttcggcgacgaattccgcgccctcatg
ggcgcagaggcggtgcgtgagctgctgagctcgatcgacgtcgacaaggaaatcgagcgc
ctgcgcaaggaactgtccgagaccggctccgaggccaagatcaagaagtacgcgaagcgc
ctcaagaccctcgagggctttcaacgctcgggcatcaagcccgattggatgatcctggag
gtcctgccggtcctgccgcccgagctgcgtccgctcgtgccgctcgacggcggccgcttc
gcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccgcaacaaccgtctcaag
cggctgctcgagctcaaggctccggagatcatcgtgcgcaacgaaaagcgcatgctccag
gaagccgtcgactcgctgctcgacaacggccggcgcggcaaggcgatgaccggcgccaac
aagcgtccgctcaagtcgcttgccgacatgatcaagggcaagggcgggcgcttccggcag
aacctgctgggcaagcgcgtcgactactccggccgttcggtgatcgtggtgggcccgcag
ctcaagctgcaccagtgcggcctgcccaagctgatggcgctcgagcttttcaagccgttc
atcttcaacaagctcgaactcatggggctggcgacgaccatcaaggccgccaagaagatg
gtcgactcgcaggagcccatcgtgtgggacatcctggaagaggtcatccgcgaacatccg
gtcatgctgaatcgggcgccgaccctgcaccgcctcggcatccaggcgttcgagcccgtg
ctgatcgagggcaaggcgatccagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggcgaccagatggccgtgcacgtgcccctgtcgctggaagcgcagctggaagcg
cgcgcgctcatgctcgcctccaacaacgtcctcttcccgtccaacggcgatccgtcgatc
gtgcccagccaggacgtcgtgctgggcctctattacgccacgcgcgagcggatcaacggc
cgcggcgaggggatgcacttcatcgacgtcgccgaggcacagcttgcactcgacgccggc
caggtcgagctccagacccgcgtcaccgtccggatccgcgaatacgacgtggaccgcgag
accggcgagcgcacggaaaagatcacgcgctacgagaccaccgtgggccgcgcgatcctc
tctgaaatcctgccgccgggcctgccgttctcggtgatgaacaagccgctcaagaagaag
gagatcagccgcctgatcaacgcggccttccgccgctgcggcctgcgcgagacggtgatt
ttcgccgatcgcctgctgcagagcggcttccgccttgcgacccgcggcggtctttcgatc
gcgatcggcgacatgcacgtgccggcgcagaaggaagagatcatccgcggcgcggaaaag
gaggtgaaggaaatcgaggcgcagtacacctcgggtctcatcacccagggcgagcggtac
aacaaggtcgtcgacatctggggccgcgccggcgaccatgtcggcaaggtgatgatggaa
cagctcgcggtcgagcgtaccgccaaccgccacggaaccgaagtcacgcaggaatcgttc
aactcgatcttcatgatggccgactcgggcgcgcgcggttccgttgcccagatccgccag
cttgccgggatgcggggcctgatggccaagcccgacggctcgatcatcgaaacgccgatc
accgcgaacttccgggaaggcctcaacgttctccagtacttcatctcgacccacggcgcg
cggaagggtctggcggacaccgcactgaagaccgcgaactccggctatctgacccgccgc
ctggttgacgtcacgcaggatctcgtcgtgacccacgacgactgcggtacggtcaacggc
gtggcgatgcgcgcgctggttgaaggcggggaggtcatcgaggccctgcgcgaccggatt
ctcggccgcgtcgctgccgccgacgtgatcaacccggagacgcaggacgtcctgtatccc
gccggaacgctgatggacgaagatgcggtcgaccgcgtcgaggaactcggcatcgacgag
gtcaaggttcgcaccccgctcagctgcgagacgcgctacggcatctgcgccaagtgctac
gggcgcgacctcggccgcggcgtgctggtcaattccggcgaagcggtcggcgtgattgcc
gcgcagtcgatcggcgagccgggcacgcagctcaccatgcggaccttccacatcggcggt
gcggcatcgcgggccgcggtgcagagctcgatcgaggccaagagcaacggcacggtccgg
ttcaccgccaccatgcgctacgtcaccaacgccaagggggaactggtcgtgatctcccgc
tccggggaagtgctggtcgcggacgacaacggccgcgagcgcgagcgccacaaggtgccg
tacggtgcgaccctcaacgtcaccgacggcaaggccgtcaaggcgggaacgcagctggcg
caatgggatccgatgacccgcccgatcgtcaccgaatacggcggcacggtccggttcgag
aacgtcgaggaaggcgtcaccgtcgccaagcagatcgacgaagtgaccggcctgtcgacg
ctggtcgtcatcgacgccaagcgccgcgggtcctcgtccaagggcgtgcgcccgcaggtc
aagctgatcggcgacgacaaccaggaagtcaagatccacggcaccgaccacgccgtgacc
atctccttcccggtgggggcgctgatcgtcgtgcgcgacggccagaccgtcggcgtcggc
gaggtgctggcgcggattccgcaggaatcgcagaagacccgcgacatcaccggcggtctg
ccccgggtcgcggaacttttcgaggcccgctcgcccaaggacgccggcatgctggcggaa
gtcaccgggacgacgtcgttcggcaaggacacgaagggcaagcagcgcctcatcatcacc
gacatggacggcaaggaacacgagttcctgatcccgaaggacaagcacgtcctggtccat
gacggccaggtggtgaacaagggcgagtccatcgtcgacggcccggcggatccgcacgac
atcctgcgcctgctggggatcgaagcgctggcccgctacatcgtcgacgaagtgcaggac
gtgtaccggctccagggcgtgaagatcaacgacaagcacatcgaggtcatcgtgcgccag
atgctgcggcgggtgcagatcaccgacgccggcgacacggccttcatccctggcgaacag
gtcgaacgctccgagatgctggacgagaacgatgccgtcatcgccaagggcggccgcccg
gcaatgtacgaaaacgtcctgctcggcatcacgaaggcgtccctgtcgaccgattcgttc
atctccgcggcctccttccaggaaaccacccgggtgctgaccgaggcggcgatcatgggc
aagcgcgacgaactccgcggcctcaaggaaaacgtcatcgtcggccggctcatccccgcc
gggtcgggcctcgcctatcaccgcgctcgcaaggagaaggaggagatcgaggccgccgaa
cggcaggcgctcgccgaactcgaggcgcaggagcgggaggagcaggcgcgggcgctggcg
gctgccgatcacgacaccgagccgggttccgaggggggcgccgaatcggtttga
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integrated database retrieval system
