Beijerinckiaceae bacterium MG08: CU048_00330
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Entry
CU048_00330 CDS
T10676
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bbai Beijerinckiaceae bacterium MG08
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_00330 (addA)
Enzymes [BR:
bbai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CU048_00330 (addA)
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CU048_00330 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
SeqA_N
DEAD
NPHP3_N
SH3_16
Motif
Other DBs
NCBI-ProteinID:
QBR69981
LinkDB
All DBs
Position
93216..96698
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AA seq
1160 aa
AA seq
DB search
MPFFEIPSDTRAKQHQASNPNHSVWVSANAGSGKTHVLAQRVVRLLLQGVAPSKILCLTF
TKAAAANMASRVFDTLADWTRAEDDELAKMILAIGAPAPDRQGLTVARKLFARTVETPGG
LKIQTIHAFCERLLHLFPFEANVPARFEVPDELRQAELLHWARRDVLAEANSGRSRLAPA
VQRVVEECGAQGFEDLIQEAMTHRAMARAGVELQSKESLRQALGLAKGEGAVQIESEMIE
HGIAPKRWSDLADMLDEGNINDKKKAVLLRRGGAAYSKGQLEDCLECYLSVFFTEGGKGS
KAQKLLTNSLAAKYPKMSAELSDEQDRLEPLRIRHKAAATFERTCALTEIAAAIFKRYHM
EKAAGGLLDFDDLVEKTLALLERSDARWVLYKLDAGIDHILVDEAQDTSESQWQILEKLT
EDFTAGWGRSSALRTFFAVGDEKQSIFSFQGAAPHMFAEMRRRFQTRFTAGAQSFTHVPL
TLSFRSVSGVLSAVDRVFSRREYQIGLVAANDVWMPHEALKHQLPGLIEVWPAVSPEERE
DQRDWTLPLDILDPQDPPSLVAKRIAQKIADLMAPGSGEYVHDGQTGRPRNISAGDILIL
VRSRGPFFEAMIRALKRKRIPTAGADRLEIASHIAVIDLVAAGRVARLPQDDLTLACVLK
SPLIGLDDEDLLRFAPGRAGSLFDALKGSLDPRHVEAARKIAVWQARAADNPFAFYSRLL
SADGGRRALEARLGPEAGDAIDEFLQLALAHESETSPALATFLDAVAGMECSIKRDMESG
HDAVRVMTVHAAKGLEAKIVFLPDSCRAPSPAHDPCIFALPTRVPGRKLIAWSPKKDLDC
AAVALAREESRQAAAEEYRRLLYVALTRAEERLYLAGFHGTRGRDAGCWAEMIEETLGEE
PGLVSVPAFWNGEEQISRRVCEPSGGPDLVPMLKEMPSNIVSGVPDWLSRPVAFEKDVKP
PVRPSNALAAADHLEGGSLSKGRREALRRGRLLHALLQYLPGVAAPRRQAKAMEFLLARA
PDLAEAARQSLAGEALNVLNTPSLAGLFGETSKAEVSVVGTVKLAEGGSIDILGQVDRIG
ETASEILVADYKTGTPRALAETPPAYLAQMALYRAVLASLWPEKRLRMLLIWTAGPLVVT
LPGELLDDALKALNSKADVA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgccatttttcgagatcccgtccgacacgcgggcaaagcagcatcaggcctcaaatcca
aatcattcggtctgggtctcggccaatgccgggtccggcaagacccatgtgctggcgcaa
cgggtcgtgcgccttctgcttcagggcgtggcaccttcgaaaatcctttgcctgacgttc
acgaaggcggccgccgcgaacatggcttcgcgggtgttcgatacgctcgccgattggacg
cgggcggaagatgatgaacttgcgaagatgatccttgccatcggagcgcccgcgccggac
aggcaggggttgaccgtcgccaggaaactgttcgcgcgcacggtcgagacgccgggcggt
ctgaaaatccaaaccattcatgctttttgcgagcggctgctgcatctgtttccgttcgag
gcgaatgttccggcgcgcttcgaggttcccgatgagctccgccaggcggaattattgcac
tgggctcggcgcgacgttcttgcagaggcaaactccggcagaagcaggcttgccccggcc
gttcaacgcgttgtggaggaatgcggcgcgcagggcttcgaagatctgatccaggaggcc
atgacacatcgggcgatggctcgggcaggggtggagcttcaatcaaaggagagcctgcgc
caggcgttgggtctggcaaagggcgaaggcgcagtccagatcgaaagtgaaatgatcgag
catgggatcgcaccgaagcgctggtccgatcttgcggatatgctcgacgaaggcaacatc
aacgacaagaaaaaagcggttctgttgcggcgtgggggggcagcgtattcgaagggacaa
ttggaagattgcctggagtgttatctctcagtcttttttaccgaaggcggcaaaggaagc
aaagcccaaaagctcctgacgaacagccttgccgccaaatatccgaagatgagcgccgaa
cttagtgacgagcaggaccggctcgagcccctgcgcattagacataaggctgcggcaact
ttcgaacgcacctgcgcgctgaccgaaatcgcggctgcgatcttcaaacgctatcatatg
gagaaagcagccggggggcttctcgacttcgacgatctggtcgagaagaccttggccctg
ctggagcgctcggatgcacgctgggtgctctataagctcgatgcggggatcgatcatatt
ctcgtcgacgaagcccaggataccagcgaatcccagtggcagatcttggagaagcttacg
gaagatttcacggcggggtgggggcgcagctcggccttgcggaccttctttgcggtcggc
gacgaaaagcaatcgatcttttcttttcaaggtgcggccccgcatatgttcgccgagatg
cggcgaagatttcagacgcggtttacggccggcgcgcagagcttcacgcatgtgcccctc
actctgtcatttcgctcagtgtcgggcgtgctgtctgctgtcgaccgggttttttcgcga
cgcgaatatcagataggactcgttgcggccaatgatgtttggatgccgcatgaagccctg
aagcatcagcttcccggtctcatcgaggtttggcctgcggtcagcccggaggagcgcgag
gaccaacgcgattggactttgccgctcgacatcctcgacccacaggacccgccaagtctg
gtcgccaagcggatcgcgcaaaagatcgcggacctcatggctcccgggtcaggtgaatat
gtgcacgatggtcaaacaggaaggccgcggaacatttccgccggcgatattctgatactg
gtacgctcgcggggacccttcttcgaggccatgatccgagccctgaaaaggaagaggatt
ccaaccgctggcgccgaccggctggaaatcgccagtcatatcgcggtgatcgatcttgtc
gcggctgggcgggtggcgcggctgccgcaagatgatcttacgctcgcttgcgtgttgaaa
tcgccattgattggcctcgatgacgaagatctcttacggttcgcgccgggccgggccggc
agtcttttcgatgcgctcaaaggctctctcgatccgcgccacgtcgaagcggcgcgtaag
atagctgtttggcaggcccgcgcggccgacaacccctttgccttttattcacgcctgctg
agcgccgatggcgggcgacgcgccctggaggcacggcttggccccgaggcgggagatgct
atcgatgagttcctgcagctcgctttggcgcatgaaagcgagacctcgccggctttggcg
acatttctcgatgccgtcgcgggcatggaatgttcgatcaagcgcgatatggagtccggc
cacgacgcagtgcgggtgatgacggttcacgcggcgaaagggctcgaagcgaaaatcgtc
tttcttcccgacagctgccgggcgccatcgccggcgcatgatccctgcatctttgccctc
cccacgcgcgtgccgggtcggaaacttatcgcctggtcgcccaaaaaggatcttgattgt
gcggcggttgcactggcgcgggaagagtcgcgccaggctgcggccgaggagtaccgtcgg
cttctctatgtggcgctgacccgggccgaagagcggctctatctcgctggatttcacggc
acgaggggacgcgacgcaggctgttgggcggagatgatcgaggagactttgggagaggaa
ccgggcttggtgtccgtgccggcattctggaacggtgaggaacaaatttcgcgccgtgtc
tgcgagccgagcggcgggccggatttggtgcctatgctgaaagaaatgccctcgaacatt
gtctcaggcgtcccggattggctttcgcggccggtggcgtttgaaaaagatgtgaagcca
ccggtgaggccttccaatgcgcttgcggccgccgatcatttggaagggggaagcctctcc
aaaggccggcgcgaggctttgcgaaggggcaggcttctccatgctttgctgcaatattta
cctggcgtcgcggcgccccgtcgccaagccaaggccatggagtttttgctggcccgcgcc
cccgaccttgccgaggcggcacgccaaagtctcgccggtgaagcgctgaacgttttgaat
acgccgtctcttgccggtctcttcggtgagacctcgaaagcggaagtgtcggtggtcggc
acagtgaagctggcggaagggggatcgatcgatatcctcggtcaggtcgatcggatcggc
gaaaccgcaagcgaaattctcgtcgccgattacaagaccggtacgccccgcgcgctggcc
gagaccccgcccgcctatctggcccagatggcgctctatcgcgcggttctggcgtcgctc
tggccagagaagcgtctgcgcatgctgttgatttggacggccggcccgcttgtcgtcacg
ctccccggcgagctgctggatgatgcgttgaaagcgcttaattcgaaagccgacgtggcc
taa
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