Beijerinckiaceae bacterium MG08: CU048_06990
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Entry
CU048_06990 CDS
T10676
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbai Beijerinckiaceae bacterium MG08
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbai03032
]
CU048_06990 (topA)
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_06990 (topA)
Enzymes [BR:
bbai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CU048_06990 (topA)
DNA replication proteins [BR:
bbai03032
]
Prokaryotic type
DNA Topoisomerases
CU048_06990 (topA)
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CU048_06990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBR71069
UniProt:
A0A4P7F4X8
LinkDB
All DBs
Position
1488916..1491771
Genome browser
AA seq
951 aa
AA seq
DB search
MNVVIVESPAKAKTIGKYLGKGYEVYASYGHVRDLPAKDGSVDPDADFAMLWDVDSQSAK
RLAEIAKAVKSADRIILATDPDREGEAISWHVLEILKAKKVLGTKPVERVVFNAITKSAI
LDAIRNPRQIDEALVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVSREYWSILAHLKTGAGAPFVARLIGADGQKIARLDIGSGGEAEAFKAELEAA
KFSVARIEAKPAKRHPAPPFTTSTLQQEASRKLGFAPARTMQLAQRLYEGADIGGETVGL
ITYMRTDGVDLAPEAITSARSVIGKEFGANYVPKAPRKYTVKAKNAQEAHEAVRPTDPAR
LPKHVARSLEPDQLRLYELIWTRTIASQMESAELERTTVDILAEAGARKIDLRATGQVIR
FDGFLKLYQEGRDDDDDDESGRLPEMHEGEALAKERIEASQHFTEPPPRFTEATLIKQME
ELGIGRPSTYASTLAVLRERDYVRLEKKRLFPEDKGRLVTAFLESFFTRYVGYDFTADLE
EKLDLVSNHELDWKQVLRDFWTDFSGALAGTKDLRTTQVLDSLNELLGPHIFPAKEDGSN
PRACPSCGAGQLSLKLGKFGAFIGCSNYPECKFTRTLANTEASDLPEGDRPGVKVLGEDP
QTGEEISLRDGRFGAYVQQGEGEKPKRSSLPKSVSPGDVTLELALGLLSLPREVAKHPET
KEPILAGMGRYGPYVQHGKTYASIGKDEDILAIGGNRAIDLIVAKESGLTGRRFGAAATA
PSRVLGEHPTGGDVVVKAGRYGPYVNHGKINATLSRDADPTTLTLEEALALLAAKADGGT
DRKGAVQGRLLGEHPAGGPITVRTGRFGPYVNYGRINATLKNDLSPDAITIEEAIRLIED
KESAGGGSRSPKRSSKAPSAKKAAPARAAKKAAPAAAAKAPAPKSKKAKRA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtcatcgtcgagtcgccggcgaaggccaaaacgatcggcaagtatctggga
aagggctatgaggtctatgcctcctatggccatgttcgggatttgccggccaaggatggt
tcggtggatccggacgcggatttcgccatgctctgggatgtcgattcccagtcggcaaaa
cggctggcggagatcgccaaggccgtcaagagcgccgaccgaattatcctcgcgaccgac
ccggaccgtgaaggggaagcgatttcctggcacgtcctcgagattttaaaggccaaaaaa
gtcctcggcaccaagccggtcgaacgggtggtcttcaacgcgatcaccaaatcggcgatt
ctcgatgccattcgcaatccccgccagatcgacgaggcgttggtcgatgcctatctggcg
cggcgcgcccttgattatcttgtcggtttcaatctctcgccggtgctgtggcggaaattg
cccggcgcccgctccgccggccgggttcaatccgtggccttgcgccttgtctgcgaccgc
gaactcgagatcgaaaaattcgtttcgcgggaatattggtcgatcctcgcccatctgaaa
accggcgccggggcccccttcgtcgcccgcctcatcggcgccgacgggcagaagattgcg
cgcctcgatatcggctcggggggcgaggcggaggccttcaaagccgagctggaggctgcc
aaattctcggtggcccgcatcgaggcgaagcccgccaagcggcacccggcgccgcccttc
accacctcaaccctgcagcaggaggcctcgcgcaaattgggatttgctcccgcccgaacc
atgcaactcgcccagcggctttacgagggcgccgacatcggcggcgaaacggttggcctc
attacctatatgcggaccgacggcgtcgacctcgccccggaagcgatcaccagcgcgcgc
agtgtcatcggcaaggagttcggcgcgaactacgtccccaaggcgccgcgcaaatatacg
gtgaaagccaagaatgcgcaggaagcgcatgaagccgttcgcccgacagacccggcaagg
ttgccgaagcatgtcgcgcgaagcctcgaaccggatcaactgcggctttacgaactgatc
tggacacgcaccattgcgagccagatggaatccgccgagctggaacgcaccacggtcgat
attctcgcggaagctggagcccgcaaaatcgacctgcgggcgaccggccaggtcattcgc
ttcgacggcttcctgaaactctatcaggaggggcgcgacgacgatgacgacgatgaaagc
ggccggctgcccgagatgcacgagggcgaggccctcgccaaggaaagaatagaggcgagc
cagcattttaccgagccgccgccgcgcttcaccgaggcgaccctcatcaaacagatggag
gagctcggcataggccgaccttcgacctatgcttcgaccctcgcggttctgcgtgaacgc
gattatgtgcggctcgaaaagaagcggctgtttcccgaagacaagggccgcctcgtcacg
gcctttctggagagctttttcacccgctatgtcggctatgattttaccgccgacctcgaa
gagaagctcgaccttgtgtccaaccatgagttggactggaaacaggtcttgcgcgatttc
tggaccgatttttcgggcgcgctcgcgggcaccaaggatctgcgaacaactcaggtcctg
gatagtctcaacgaactcctcggcccgcatatttttccggccaaggaagacggctcgaac
ccacgcgcctgcccctcctgcggcgccggccagctttcgctcaaactcggcaaattcgga
gccttcatcggctgctccaactatcccgaatgcaaattcacccgcaccttggcaaatacc
gaggccagcgacctgcctgagggggatcgcccgggggtcaaggttctcggcgaagacccg
cagacgggggaagaaatttcgctccgcgatgggcgtttcggcgcctatgtgcagcaaggc
gaaggcgaaaagccgaagcgctcttccctgcccaaaagcgtcagtcccggcgacgtgacc
ctggagctggccctcgggctgctgtcgcttccccgcgaggtcgccaaacaccccgagacc
aaagagccgatcctggccggcatgggccgctacggtccctatgtccaacatggcaagacc
tacgcaagcatcggcaaggacgaagatatcctcgccatcggcggcaaccgggcgatcgat
ctcatcgtcgccaaggaaagcggcttgaccggtcgacggttcggcgccgccgcgaccgcg
ccctcgcgggtgctcggggagcatccgacggggggcgacgtggtcgtcaaggccggtcgc
tatggcccttatgtcaatcacggcaaaatcaacgcgaccttgtcccgcgatgccgacccc
accacattgaccttggaagaagcgctcgcgcttctcgccgcgaaagccgacggcggaacg
gatcgcaaaggtgccgttcagggtcgtcttctcggggagcatcctgcgggcgggcccatc
accgtccggacaggacgcttcggtccttatgtgaattacggtaggatcaacgcgaccctg
aaaaacgatctttccccggatgcgatcacgatcgaggaagctatccgcctgatcgaggac
aaggagagcgcgggaggcggttcgaggtcccccaaaagatcatccaaagcgccttcggcc
aagaaagcggctccggccagagcagccaagaaagccgcgccggcagcagccgccaaggcg
ccggctccgaaatcgaaaaaggctaagcgagcgtga
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