Beijerinckiaceae bacterium MG08: CU048_09065
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Entry
CU048_09065 CDS
T10676
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbai Beijerinckiaceae bacterium MG08
Pathway
bbai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CU048_09065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbai03019
]
CU048_09065
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_09065
Enzymes [BR:
bbai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CU048_09065
Messenger RNA biogenesis [BR:
bbai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CU048_09065
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CU048_09065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
MFD_D3
Glyco_hydro_57
DUF5575_C
Helicase_Sgs1
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QBR71406
UniProt:
A0A4P7F8E9
LinkDB
All DBs
Position
complement(1943119..1944783)
Genome browser
AA seq
554 aa
AA seq
DB search
MPRREIGGVVDAGMSEAKEALNRVFGFADFRPGQQEILEAVFAGENILAIMPTGSGKSLC
YQLPALVRKGLTVVVSPLIALMRDQVQQLQARGIAAATLNSSISGADNAAVEAGLRRGLY
RLVYVSPERLVRPDMPALLREAGAQMFAIDEAHCVSQWGHDFRPEYLGIAQAARAIGDLQ
IIAVTATADLSTRSEIAERLFPAPPNVFVRSFDRPNIRLAFRRRTDTIRQIETVLHRHKR
QSGIIYCRTRKGSESLAQILAERGVPTLAYHAGLEPQSRSDREDEFLRHDAMIMVATIAF
GMGIDKPNVRFVCHADLPDSIEAYYHETGRAGRDGLPAESMTLFNESDIEKRAKQIFMSD
APEDRKRIERQKLDSLVALCESPRCRRQTLLGAFGEASMPCGNCDNCDGRWPSLARIAAA
QRVPSAIQRAARRLFAHRTAGFFADSGATDLAQVEEMGDKPWTFEPPKARMQIEQLTARQ
NKLFVALKAKRLEIALRQRQAPVLIFDDAILFEMAKTCPKTREEVMSIPGVQQEKFDRYG
ATFLAVVLDHSELS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgtgaaatcgggggcgtcgtggacgccggcatgagcgaggcgaaggaagcg
ctgaaccgcgttttcggctttgccgatttccggccgggtcagcaagaaattctcgaagcc
gtgttcgcgggcgaaaacattttggcgatcatgccgacggggtctggcaaatcgctgtgc
taccaattgccggcgctggtgcgtaaaggtcttaccgtcgttgtttcgcctctcatcgcc
ttgatgcgtgaccaggtccagcaactgcaagcgcgtggaattgcggcagcgacgttgaac
tcgtcaatcagcggcgcggataatgcggcggtggaggccggcctccgtcgtggtctttat
cgccttgtctatgtctcgcccgagcgcctggtacgccccgatatgccggcgcttctgcgc
gaggccggcgcgcagatgttcgccattgacgaggcccattgcgtcagccaatggggacat
gacttccgcccggaatatctgggcattgcgcaagcggcgcgggccattggcgatcttcag
atcatcgcggtcactgcgacggccgatctatcgacccggtcggaaatcgccgagcggctc
tttcccgcgccgccgaatgtctttgtccggtcattcgatcggccaaatatccgcctcgcc
ttccgtcgccgcaccgataccatccgccagatcgaaacagttcttcatcggcacaaaagg
cagagtggcattatctattgcaggacgcgcaagggttccgaaagcctggcgcaaatcttg
gccgaacgcggggtgccgacacttgcctatcacgcgggacttgaaccccaatcgagatcc
gaccgcgaggacgagtttctgcgtcatgatgcgatgattatggttgccaccatcgcgttc
ggcatggggatcgacaagcccaatgtccgcttcgtgtgtcatgcggatttgcctgacagc
atcgaggcctattatcacgaaaccggccgggcggggcgcgacggactccccgcggaatcg
atgacgctgttcaatgaaagcgacattgaaaagcgcgcgaaacaaattttcatgagcgat
gcgccggaagatcgcaaacggatcgagagacagaagctcgactccctggtcgccttgtgc
gaatcgccgcgttgtcgccgccagaccttgctcggggcctttggagaggcctcgatgcct
tgcggcaattgtgacaattgcgacgggcggtggccatcgctggcgcgtatcgccgccgcg
caaagagtcccctctgcaatccagcgagctgcaagacgcctttttgcccatcgcaccgcc
ggttttttcgcggactcgggggcaactgatctcgcccaagtagaagagatgggagataag
ccttggacctttgagccgcccaaggcgcggatgcaaatcgagcagctgacggcgcggcaa
aataaactcttcgtggcgctcaaagcgaagcgtcttgaaatcgccctacggcaaaggcag
gctcccgtgcttattttcgatgacgcgattttgttcgagatggcgaagacatgtcccaag
acccgcgaagaggttatgagcattcctggagttcagcaggaaaaattcgaccgctatggt
gcgacgttccttgccgtcgttttggatcatagcgaattgtcatga
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