Beijerinckiaceae bacterium MG08: CU048_09870
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Entry
CU048_09870 CDS
T10676
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbai Beijerinckiaceae bacterium MG08
Pathway
bbai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CU048_09870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_09870
Enzymes [BR:
bbai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CU048_09870
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CU048_09870
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CU048_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QBR71532
UniProt:
A0A4V1B8E2
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All DBs
Position
2111503..2112375
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AA seq
290 aa
AA seq
DB search
MPELPEVETVRRGLEPAMVGARLESVDQRRPDLRFPFPERFAERLTGRRVEALRRRAKYL
LADLDGAEVLVMHLGMSGSFRIEQNGQHGPAPGVAAKNSAHDHVAFDLSNGARIIYNDPR
RFGFMQLIPYPDVATHPLFRNIGIEPLGNEFSGESLAALFAGKTTSLKSALLDQTLIAGL
GNIYVCEALYRAGLSPRRAAASLVRKDGTPNRRANLLASVIRDVLNEAVAAGGSSLRDHR
QADGALGYFQHNFRVYGRDREPCVRPDCGGTVQRFTQSGRATFYCGACQR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcctgaagtcgaaaccgttcgccgaggtcttgaaccggccatggttggc
gcacgactcgagagcgtcgatcagaggcggccggatctgcggtttccctttccggagcgg
tttgccgagcgactgaccggccggcgtgtcgaggcgctccgccgccgggcaaaatatctg
ctcgccgatctcgacggcgcggaggtgcttgtcatgcatcttggcatgtcgggatcgttt
cgcatcgagcaaaacggccagcacgggccggcgcccggggtcgcggccaaaaattccgcg
catgatcatgtcgccttcgatctctcgaatggcgcgcgaatcatctacaacgacccccgc
cgttttggcttcatgcaattgattccctatcccgatgtcgcaacgcatccgctgtttcgg
aacatcggaatagagccgctgggcaatgaatttagcggcgagtccttggcggctctgttc
gccggcaagacaacatcgctgaaatcggcgctcctcgatcaaaccttgatcgcgggtctt
ggcaatatctatgtgtgtgaggctctctatcgcgccggactgtcgccgcgccgggccgca
gccagtcttgtccgcaaggatggcacgccgaatagacgcgcaaatcttctcgccagcgtc
attcgggatgttctcaacgaggcggtggcggcgggcggctcgtcgttgcgcgatcatcgc
caggccgacggggcgctcggctatttccagcataatttccgggtatacgggcgggaccga
gagccttgcgtccgcccggattgcggtgggaccgtgcaacggttcacacagtcaggccgc
gccaccttttattgcggcgcctgccagaggtaa
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