Beijerinckiaceae bacterium MG08: CU048_11010
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Entry
CU048_11010 CDS
T10676
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bbai Beijerinckiaceae bacterium MG08
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbai03032
]
CU048_11010
03036 Chromosome and associated proteins [BR:
bbai03036
]
CU048_11010
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_11010
DNA replication proteins [BR:
bbai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CU048_11010
Chromosome and associated proteins [BR:
bbai03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CU048_11010
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CU048_11010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
QBR71716
UniProt:
A0A4P7F978
LinkDB
All DBs
Position
2342618..2342908
Genome browser
AA seq
96 aa
AA seq
DB search
MIKSELVQRIANRNPHLYVRDVEKIVNAILDEITAALSRGDRVELRGFGAFSVKHRDARV
GRNPRTGAHVPVSEKTVPFFKTGKEMRERLNEENSV
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatctgagctcgtccagcggatcgcgaaccgcaacccacacctctacgttcgc
gatgtagaaaagatcgtcaatgccatcctagatgaaatcaccgcagcgttgtctcgaggc
gatcgggtcgaattgcgtggcttcggggctttttccgtcaagcatcgcgatgcgcgggtt
ggccgcaaccctcggacgggagcgcatgttccggtgagcgaaaagacggttccttttttc
aagaccggcaaggaaatgcgcgaacgcttgaacgaagaaaatagcgtctga
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