Beijerinckiaceae bacterium MG08: CU048_11140
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Entry
CU048_11140 CDS
T10676
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbai Beijerinckiaceae bacterium MG08
Pathway
bbai02020
Two-component system
bbai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CU048_11140 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CU048_11140 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbai03021
]
CU048_11140 (rpoN)
Transcription machinery [BR:
bbai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CU048_11140 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_3
HTH_23
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QBR71737
LinkDB
All DBs
Position
2364882..2366432
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AA seq
516 aa
AA seq
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MALSTKLVMRQGQSLVMTPQLLQAIKLLQFSNQELVAFVEEELERNPLLERAEDATDPTP
TPSAEGHGEAELSETRDFNEASEAEWSTESFETDRGALEASLGTELSNSFDDDRPQTPGQ
TSLEPEGLGLSATSWSGSSGGGGDGEAANLEAYVAAPTNLKDHLEAQLALTTADAADRLI
GQVLIDSIDDAGYFTGSLDEIALRLEIPVQRLESVLTLIQGFDPSGVGARNLAECLAIQL
RERDRFDPAMQALVAHLNLLAKRDFAALRKICGVDEEDILDMLGEIRRLDPKPGRSFGGG
LIEPALPDVIVRPLPDGSWQVELNTEVLPRILVNQSYVARVGKGKGKEADRNFISACRQT
ANWLTKSLEQRARTILKVSSEIVRQQDAFLVHGVEYLRPLDLKTIAEAIGVHESTVSRVT
SNKYMATPRGLFELKYFFTASIAAHDGGDAHSAESVRFRIRQMIDQENPGQILSDDAIVA
KLKDVNIDIARRTVAKYRESLKIPCSVERRREKAMS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttctaccaagcttgttatgcggcagggccagtcgctggtgatgacgccgcag
ttgctgcaagcgatcaagcttctgcaattttccaaccaggaattggtcgcgtttgtcgag
gaggagctggagcgcaatcctttgctcgagcgggccgaagatgccacggacccgaccccg
acccccagtgccgaaggtcacggcgaggccgagctttcggaaacgcgggatttcaatgaa
gccagcgaggcggagtggagcaccgagtctttcgagaccgatcgaggggccttggaggcg
agcctcggaaccgaattgtcgaacagctttgatgacgaccggccgcagaccccagggcaa
acaagcttggagccggaaggtctgggtctttctgcaacgtcctggtccggttcatcgggt
gggggcggcgacggagaggcagcaaatctcgaggcgtatgtcgctgcgccgaccaatctc
aaggatcatttggaagcgcaattggcgctgacgacagccgatgcggcggatcggctgatc
ggccaagtcttgatcgactcgattgatgatgccggttacttcacggggtcgctcgacgag
atcgctcttcgtttggagatcccggtgcagcggctggaaagtgttttgacgctgatccag
ggcttcgacccctcgggagtcggcgcccgtaatctcgctgaatgtcttgccatacagctg
cgggagcgcgatcgcttcgacccggcgatgcaagcgcttgtggcccatctcaacctcttg
gccaaacgcgattttgccgcgttgcgtaaaatttgcggcgtcgatgaagaagacattctg
gatatgctgggcgagattcggcgtctcgatcccaagcccggacgttcgttcggcggcggt
cttatcgagcctgccttgccagatgtcattgtccggcccttgcctgacggttcgtggcag
gtcgaactgaataccgaagtgctcccgcgtattctcgtcaatcagtcctatgtggcgcgg
gtcggcaaagggaagggcaaggaggccgaccggaatttcatctccgcgtgccggcaaacc
gccaattggctaaccaaaagtctcgaacagcgggcgcgcacaattttgaaggtgtcgagc
gaaatcgtgcggcagcaagatgcatttctcgtacatggtgtcgaatatttgcgtccgctc
gatctcaaaacaatcgcggaagcgatcggcgtccatgaatcaaccgtgtcgcgggtcact
tccaataaatatatggcgacgccgcgcggcctattcgaactcaagtattttttcaccgcc
tcgattgccgcgcatgacggcggagacgcgcattcggccgaatctgtgcggttcaggatc
cggcagatgatcgatcaggaaaatccgggccaaatactttccgacgatgcgatcgtcgcc
aaattgaaggacgtcaatatcgatatcgcccggcggaccgtggctaaatatcgcgaaagc
ctgaagattccatgttcggtggaacgccgccgcgagaaggcgatgagctga
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