Beijerinckiaceae bacterium MG08: CU048_11460
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Entry
CU048_11460 CDS
T10676
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bbai Beijerinckiaceae bacterium MG08
Pathway
bbai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CU048_11460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_11460
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CU048_11460
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CU048_11460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF2963
AAA_22
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QBR71785
LinkDB
All DBs
Position
2432922..2435504
Genome browser
AA seq
860 aa
AA seq
DB search
MPKAPKTPGGKRPARSKAARPEVTPLGEHLAALLNPALNQRQLGVSEGPQAEFEVSTASR
IDARLLGLETNDGQAPSAPLYHPVGMTGVAATVESLKDLLERGDPNIREKKPWMPHRPSR
PEKSEGGQRFRVVSEYEPKGDQPVAIEELVKGIEAKERDQVLLGVTGSGKTFTMAQVIAS
TNRPALVLAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSI
NEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFTVKQGEKIDQRQLIAD
LVALQYKRSAGDFSRGVFRVRGDTIELFPAHYEDRAWRIGFFGDSIESIAEFDPLTGKKT
QDLEFVKVYANSHYVTPRPTLLQSIKGIKIELKQRLNELNAAGRLLEAQRLEQRTMFDLE
MLEATGSCAGIENYSRYLTGRRPGEPPPTLFEYLPDNALVFADESHVTIPQIGAMYRGDF
RRKATLAEYGFRLPSCLDNRPLRFEEWDAMRPQSVHVSATPGSWEMERTGGVFVEQVIRP
TGLIDPPVEIRPARAQVDDLLGEVREVALKGYRSLVTVLTKRMAEDLTEYLHEHGIRVRY
MHSDIDTIERIEIIRDLRLGAFDVLVGINLLREGLDIPECALVAILDADKEGFLRSETSL
VQTIGRAARNIDGKVILYADHETGSMIRAIAETDRRREKQQAYNAAHGITPASIKRGIAD
ILGSVYEQDHVTVDAGLAVPEMLAGHNFKATIADLEKRMREAAANLDFEEAARYRDELKR
LQQVELAIADDPLASQRDVEAQAGAFGGTRKYGSAANLPASRPHKPTDAEMGPHNFGGGE
AKPRSSAGKGGTRAWKGKRR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagctcccaaaacccctggcggaaagagacccgcccgctccaaagcggcgcgg
cccgaggtcacgccgctcggcgaacatctggcggcgcttctcaatccggcgctgaaccag
cgccagcttggcgtttccgaggggccgcaagccgagtttgaggtctcgacggcctcccgc
atcgacgcgaggctgctcgggctcgaaacaaacgacgggcaggctccctccgcgcccttg
taccaccctgtggggatgaccggcgtcgcggcgactgtcgaatcgctgaaggatctgctc
gagcgcggcgatccgaacatcagggaaaaaaagccgtggatgccgcaccgtccgtcgcgt
ccggagaaatcggaaggcggtcagagatttcgcgtggtctccgaatatgagccaaagggc
gaccagccggtcgccatagaagaacttgtgaagggcatcgaagccaaggagcgcgatcag
gtgcttttgggcgtcaccggctcgggtaagaccttcaccatggcgcaggtcatcgcgagc
accaatcgtccggctctcgttctggcgccgaacaagactttggcggcgcagctttatggc
gagttcaagagtttctttccggacaatgcggtcgaatatttcgtttcctactacgactat
tatcagccggaagcctatgtgccgcggtccgatacctatatcgagaaggaaagctcgatc
aacgagcagatcgaccggatgcgccacgccgcgacgcgcgcgctgcttgaacgtgacgac
gtcatcatcgtcgcttcggtttcctgcatctatggcatcggttcggtcgaaacctatacg
gcgatgaccttcaccgtaaagcagggcgagaagatcgatcagcgccagctcatcgcggat
ctcgtcgccttgcaatacaagcgatcggccggcgatttttcgcgcggcgtgtttcgtgtg
cgcggcgatacgatcgagcttttcccggcccactacgaagaccgcgcctggcgcatcggc
ttctttggcgattcgatcgaatccattgccgaattcgatccgttgaccggcaaaaagacc
caggatctcgaattcgttaaggtctatgcgaattcgcattacgtcacgccgcgcccaacc
cttcttcagtcgatcaagggcatcaagatcgaactcaagcagcgtcttaacgaactcaat
gccgccggccgcttgctcgaagcgcaaagactcgagcaacgtaccatgttcgacctcgaa
atgctggaagcgactggatcctgcgcgggaatcgaaaattactcccgctatctcactggg
cggcgtcccggcgagccgccgccgaccctgtttgaatatttgcccgataatgcgcttgtc
ttcgccgatgaatcgcacgtcaccatcccacaaatcggcgccatgtatcggggcgacttc
cggcgcaaggcgacgctcgccgaatatgggtttcgcctgccgtcctgcctcgacaacagg
cctctgcgtttcgaggaatgggacgcgatgcggccgcaatcggtccatgtgtcggcgacg
cccggctcctgggaaatggagcgcacgggcggcgtcttcgtcgagcaggtcatccgcccg
accgggctcatcgatccgcctgtggagatcaggccggcccgcgcgcaggtcgacgatctt
ttgggcgaagtccgcgaggtggcgttaaaaggctaccgcagcctcgtcaccgttttgacc
aagcgcatggcggaggatttgaccgaatatttgcacgagcacggcatccgagtgcgctac
atgcattccgatatcgatacgatcgagcggatcgagatcatccgcgacttgcggctcggc
gccttcgatgtgctcgtcggcatcaatctgttgcgggaggggctggatattccagaatgc
gccctcgttgccattctcgatgccgacaaggaaggctttctgcgcagcgagacgtccttg
gttcagaccatcggccgcgcggcgcgcaatatcgacggcaaggtcattctttacgccgat
catgagacgggctccatgatccgcgcgatcgccgagaccgaccgtaggcgtgaaaagcag
caggcctataatgccgcccatgggattacgccagcctcgatcaaacgcggaatcgcggat
attttgggctcggtctatgagcaagatcatgtcacggtcgatgccggtctcgccgtgccg
gaaatgctcgcaggacataatttcaaggcgaccatcgccgatctcgaaaagcgcatgcgg
gaagccgccgccaatctcgatttcgaggaagccgcgcgctatcgcgacgaattgaagcgt
cttcagcaagtggaactcgccattgccgatgacccgctggccagtcagcgggatgtggaa
gcgcaggccggggcttttggcggcacgcggaaatatggaagcgccgccaatctgcccgcg
agccggccgcataagccgaccgacgctgaaatggggccgcataattttggcggcggggag
gccaagccccgctcatcggccggcaaaggcgggacgcgggcttggaaaggcaagcggcgg
tga
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