Beijerinckiaceae bacterium MG08: CU048_12645
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Entry
CU048_12645 CDS
T10676
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
bbai Beijerinckiaceae bacterium MG08
Pathway
bbai02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CU048_12645 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbai03000
]
CU048_12645 (nifA)
Transcription factors [BR:
bbai03000
]
Prokaryotic type
Helix-turn-helix
Other families
CU048_12645 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
Mg_chelatase
AAA_5
AAA_2
AAA
MCM
AAA_16
bpMoxR
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QBR72910
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All DBs
Position
2660711..2662462
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AA seq
583 aa
AA seq
DB search
MISSTRDGLNFTSHHAPDSNEFSNRAEIALHGVYEISKILAIPARLETTLSNVLKLLSSF
LEMRHGTIALLDADGAPKIVVGLGWNEENAKTHFDRIPERAIGQIVTTKMPVVIEDVAKN
PLFADWSASERGKTDSRVSFIGVPIKERDRVIGTLTIDRIWDGRADFRFDEDVRFLAMIA
NLVGQTVRLHDVVLRDRERLMTEQYRLEKELSESAPAEREPRLKGIIGESDAIRSVLDKI
KIVARSNSTVLLRGESGTGKELFARATHDLSPRKKGPFIKLNCAALPESVLESELFGHER
GAFTGAMAQRKGRFELADRGTLFLDEIGEISPTFQAKLLRVLQEGEFERVGGMRTLKVDV
RLVAATNKNLEDAVARGEFRADLYYRINVVSISLPALRDRPDDVYILAREFLRRFNQEHG
TQLALTSSAKGVLEECYFPGNVRELENCVRRTATLAKDVKIVADDFACRHDECLSSTLWK
GPIPTSGSLKIIAKPAPQPAARTPVPEPSPPPREVEVAPQANSCPQSDSCSVLHGEGQSE
RDRLLEAMETAGWVQAKAARLLNLTPRQIGYALRKHDIPIKRF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgattagctccacaagggacggcttgaattttacctctcatcacgcgcccgactccaac
gagttctccaaccgcgctgagatcgctctccatggcgtgtacgagatctcgaagattctc
gcgattcccgcgcgcctcgagacaaccctttcgaatgtcctgaagctgctttcgagtttc
ctcgaaatgcggcacggaacgatcgcgcttctggacgcggacggcgcgccgaaaattgtc
gtgggcttgggctggaatgaggaaaatgcgaaaacccatttcgaccggattccagaacgg
gctattggtcaaatcgtgacgaccaaaatgccggtcgttatcgaagacgtcgcgaaaaac
cccttgtttgcggattggtcggcctccgagcggggaaagaccgattcaagagtttcattc
attggcgttccgatcaaggagcgcgacagggtgatcggcacgctgacgatcgatcggatt
tgggatggccgcgccgatttccgcttcgatgaggatgtccgttttcttgcaatgatcgcc
aatctggttgggcagacagtgcgcctccatgatgtcgtcttgcgcgatcgcgagcgcctt
atgacagagcaataccggcttgagaaggagctgtccgagtccgccccggcggaacgcgaa
ccacgcttgaagggtatcattggcgaaagcgatgcgatccgctccgtcctcgacaagatc
aagatcgtcgcgcgcagcaattcgacggtgctgctgcgtggagaatcggggaccggcaag
gagcttttcgcacgcgccacccacgatctttctccgcgcaagaaagggcctttcatcaag
ctcaactgcgccgcattgcccgagtcggtgctggaatccgagcttttcgggcatgagaga
ggcgcgtttaccggcgcgatggcgcagcgcaaaggccgctttgaactggccgatcgcggc
accttgtttctggacgagattggcgaaatctcgccgacgtttcaggcgaagcttcttcgg
gtgcttcaagaaggcgagtttgagcgggttggggggatgcggacgctcaaggtcgacgtc
cgcctggtcgcagccacgaacaagaatctcgaagatgccgtcgctcgcggggagttccgc
gccgatctctattaccgcatcaatgttgtctcgatttcgcttccggcgcttcgagaccgg
cccgacgatgtctacattctggcccgtgaatttctgcgccggttcaatcaggaacatgga
acccagctggccctgacgtcctcggccaaaggcgtcctggaggaatgttattttcccggc
aatgtgcgggaacttgaaaattgtgtgcggcgaacagccacgctggccaaggatgtgaaa
attgtcgccgacgatttcgcctgccgtcatgacgagtgtctatcttcgactctgtggaaa
gggcccatcccgacatccggatcgctgaagatcatcgccaaacccgcgccacaacccgcc
gcgcggactccggtgccggagccttccccgccgccgcgcgaggtggaagtcgctccccag
gcgaattcctgccctcagtcggacagttgtagcgttttgcacggggaaggtcagtcggaa
cgggatcgcttgctcgaggcgatggagacggctggctgggtgcaggccaaggccgcgcgc
ttgctgaatttgactccgcggcagattggctacgctctgcgcaagcacgatattccgatc
aaacgattctga
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