Beijerinckiaceae bacterium MG08: CU048_14920
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Entry
CU048_14920 CDS
T10676
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbai Beijerinckiaceae bacterium MG08
Pathway
bbai03030
DNA replication
bbai03430
Mismatch repair
bbai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CU048_14920
03430 Mismatch repair
CU048_14920
03440 Homologous recombination
CU048_14920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbai03032
]
CU048_14920
03400 DNA repair and recombination proteins [BR:
bbai03400
]
CU048_14920
Enzymes [BR:
bbai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CU048_14920
DNA replication proteins [BR:
bbai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CU048_14920
DNA repair and recombination proteins [BR:
bbai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CU048_14920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Ribosomal_S13
DUF6374
Motif
Other DBs
NCBI-ProteinID:
QBR72357
LinkDB
All DBs
Position
3115208..3118666
Genome browser
AA seq
1152 aa
AA seq
DB search
MNDVGFVHLHVHSSCSLREGAMPIGRLAKLAVADGMPALAITDTNNLFGALEFSEKLAKE
GVQPIIGLQIALDFGDGAAMAPRAGVNTAGHANIVLLAQDAAGYLNLMHVASRAWLDPEP
GDLPHVDIARLEARTQGLIALTGGPNGPLDLAFAHNRPELAHARMAALQELFGGRLYVEI
QRHGLSSEHAIEPRLLDLAYRSSLPLVATNEVFFAAASDYEAHDALICIAEGTVIGDQNR
RQLSPDHRFKSRSEMVALFADLPEATRNSVEIALRCAYRPLTRKPILPRYAASGALEDEA
EELRIEAEAGLAARLAAHGPAHGFSIEDYRERLAFELDVIIKMHFPGYFLIVADFIKHAK
AQQIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQERRD
EVIAYVRRRYGDDKVAQIITFGSFLARGVMRNVGRVLEMPLGQVDKLAKMVPQNPAAPVS
LKQAIELEPRLKEAADTEPRVAKMLQIAQTLEGLYSNASTHAAGIVIGDRPLEELVPLYR
DPKSDMPATQFNMKWVEQAGLVKFDFLGLKTLTVLSYCLKLLKKRGVAIDLLTIPLDDKK
TFAMLERGETVGVFQLESAGMRKAVTDMRADRFEDLIALVALYRPGPMANIPVYCARKNG
EEPIEYALPELEPILRETFGVITYQEQVQQIARDLAGYSLAQADLLRRAMGKKIKAEMDA
QRERFVSGAIERKIAKPTADAIFDACAKFAEYGFNKSHSAPYALLSYQTAWLKANYPVEF
LAASMTLDKSNTDKLAEFCNEARRLGIKVLPPSVQTSGADFEPAQIDGQPAIKYALSAIK
GVGEAQALAVARINGVMTQDQSGLGFRDLNDFATRLDSRDVNKRMLESLASAGAFDELEP
DRARVVAGAEAILASVHRRQEERLAGQSVLFGGEIRETIVLPKVESWSLAERLRREFDAV
GFFLSGHPLDAYAAILARLRVQRWVDFAHAVKQGASAGRLAATVLDRYERRTKSGSKMGI
VQLSDPSGQYEAILFQEGLNQYRDLLEKGAGVLVGLQGNVEGEDVRARIVSVEPLDQAAS
RIGKGLRVFLRDENPLSQIARKLTSQGEGEVSLILLTPSGEVEVKLPGKFSVSPQVAGAL
KAIPGIVAVEHV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgtcggcttcgttcatcttcatgtgcacagctcctgctcgttgcgggaaggc
gccatgccgatcggcagattggccaagctcgcggtcgcggatgggatgcctgcgctcgcc
attaccgacactaacaatctttttggcgccttggaattctccgaaaagctcgcgaaggaa
ggcgtgcagccgatcatcggcttgcaaattgccctcgatttcggggatggggcggcgatg
gcgccgcgcgccggggtcaatacggccggccatgccaacatcgttctccttgcccaggac
gcggcaggatatttgaacctcatgcatgttgcttcccgcgcttggctcgatcccgagccg
ggagatctgccgcacgtcgacatcgcgcggctcgaagcgcggacgcaagggctgatcgcc
ctgacaggaggtccgaacggtcccctcgacttggccttcgcgcataatcgtcccgagctg
gcccatgcccgcatggccgcgcttcaagagctattcggtggccgcctttatgtcgagatt
cagcgtcatggcttgagctccgaacatgccatcgaaccgcgtcttcttgatctcgcctat
cgctcgtcgcttccgcttgtggccaccaacgaggtgttcttcgcggcggcctccgattac
gaagcgcatgatgcgctgatttgcattgccgaaggcacggtcatcggcgaccaaaaccgc
cgccagctttctcccgaccatcggttcaagagccggtccgagatggttgcgctttttgcc
gatcttcccgaggccacgcgcaacagcgtcgagatcgctctgcggtgtgcctatcggccg
ttgacccgcaaaccgatcttgccacgttatgcagccagcggtgccctcgaggacgaagcg
gaggaactccgcatcgaggcagaggccggattggcggcgcgtcttgcggcgcatggaccg
gcacacggcttctctatcgaggattatcgcgaaaggcttgccttcgaactcgacgtcatc
atcaaaatgcacttcccaggctatttcttgatcgtcgcggatttcatcaaacatgccaaa
gcccagcagattccggtcggacccgggcgcggatcaggcgccggctcgctggtggcctat
gcgctcacgatcaccgatctcgatccgatccgtttcgggctcctgttcgagcgcttcctc
aaccccgaacgcgtgtcgatgccggatttcgatatcgatttctgtcaggaacggcgcgat
gaggtgatcgcctatgtccggcgtcgatacggcgacgacaaagttgcgcaaatcatcacc
ttcggatcgtttctggcgcgcggtgtcatgcgcaatgtcggtcgggtcctcgaaatgccg
ctcggccaggtcgataagctggccaagatggtgccgcaaaatccggccgccccggtaagc
cttaagcaggcgatcgagctggagccgcggctgaaggaggcggccgacacagagccacgc
gttgccaaaatgctccagatcgcgcaaacgctggaagggctttactccaatgcctcgacc
catgcggcgggcattgtcattggtgaccggccgctggaagagcttgtgccgctctatcgc
gatcctaagtccgatatgccggcgacccaattcaatatgaaatgggtggagcaggcgggc
ctggtaaagttcgacttccttggcctcaagacgctgaccgtcctgtcctactgtctcaaa
cttctaaaaaagcgcggtgtcgcgattgatctattaacaatccctttggacgataagaaa
accttcgccatgctggagcgtggcgaaaccgtcggcgtgttccagctggaaagcgcgggc
atgcgcaaggccgtaaccgatatgcgggccgaccgtttcgaggacctcatcgcgctggtg
gcgctttaccggcccggcccgatggccaatattccggtctattgcgctcggaagaatggc
gaagagcctatcgaatacgcgcttcccgaacttgagcccatcctgcgtgagacgttcgga
gtgatcacgtatcaggaacaggtccagcagatcgcccgcgatcttgccggctacagcctt
gcccaggcggatctcttgcggcgtgctatgggcaagaagatcaaggccgagatggatgcg
cagcgcgaacgcttcgtgtctggcgcgatcgaaagaaagatcgccaagccgactgccgat
gctatttttgatgcctgtgcgaaatttgccgaatacgggttcaataagtctcattcggct
ccctacgccttgctttcctatcagacggcctggctcaaggcgaattatccggtcgaattt
ctcgccgcttccatgacgctcgacaaatcgaataccgacaagctggccgaattctgcaac
gaggcgcggcggttggggattaaagtcctgccgccttcggtgcaaacgtcgggcgccgat
ttcgagcccgcccaaatcgatggccaaccggctatcaaatatgcgctctcggcgatcaag
ggcgttggcgaggcgcaagcgctggcggttgcaagaatcaatggcgtcatgacgcaagat
caaagcggccttggctttcgcgatctgaacgatttcgcgacgagactcgactcgcgcgat
gtcaacaagcggatgttggaaagcctcgcctcggccggcgccttcgacgagctcgaaccc
gaccgggcgcgggttgttgctggcgccgaagcgatccttgcctcggtccatcggcgtcag
gaggagcgactggccggccaaagcgtgttgttcggcggcgaaatccgcgaaaccatcgtc
ttgccgaaagtggagtcctggtcgcttgccgaacggctgcggcgcgagttcgatgcggtc
ggattttttctatccggccatccgctcgatgcctatgcggcaattctcgcgcgattgcgg
gtgcagcgctgggtggatttcgcgcacgccgtcaagcagggcgcctccgccggccggctc
gccgcaactgttcttgatcgatatgagcgccgaaccaaatcgggctcgaaaatgggcatc
gttcagctctcggatccctccggccaatatgaagcgatcctttttcaggaaggcctcaac
caataccgcgatcttctggaaaaaggcgccggcgtcctcgttggcttgcaaggcaatgtc
gaaggtgaggacgtgcgggcgcgcattgtttccgtcgaacctttggatcaagcggccagc
cggatcggcaaagggctccgggtttttctacgcgacgaaaatccgctgagccagatcgcc
cggaagttgacgtcgcaaggcgagggcgaagtgtcgcttattctcctgacccccagcggc
gaagtcgaagtgaaacttcccggcaagttttcggtttcaccgcaagtcgcgggcgccctc
aaagccataccgggaatcgtcgcggtcgagcatgtttaa
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