Bacillaceae bacterium IKA-2: RJD24_00500
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Entry
RJD24_00500 CDS
T10990
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RJD24_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbam03021
]
RJD24_00500
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_00500
Enzymes [BR:
bbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RJD24_00500
Transcription machinery [BR:
bbam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RJD24_00500
DNA repair and recombination proteins [BR:
bbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RJD24_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WNF36997
LinkDB
All DBs
Position
complement(80930..81874)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITAVQVDG
VLHEFSTIEGVVEDVTSIILNLKKLSLKIYSDEDKTLEIDIQGEGVVTAADITHDSDVDI
LNPDLHIATLAKGAHFHMRLTARRGRGYVPAEANKKDDMPIGVVPIDSIYTPVSRVNYQV
ENTRVGQVANYDKLTLDVWTDGSIRPEEAVAIGAKILTEHLNIFVGLTDQAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTHKTEEDMMKVRNLGRKSLEEVQ
EKLGELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaaccaaagattgaaacggttgaaattagtgatgatgcaaagttt
ggaaagtttgttgttgaaccgctcgaacgcggttacggaacaactttaggtaattccttg
cgacgtattttactttcatcgctaccaggtgcggctataacagcagtacaagttgatgga
gtattacatgaattttcaactattgaaggcgtcgttgaagacgtaacttcaatcattctt
aatttaaagaagctttctctaaaaatctattctgatgaagataaaacattagaaattgat
attcagggcgaaggtgtagttactgcagcagatattactcacgacagcgatgtagatatc
ttaaacccagatttgcatattgcaacccttgcaaaaggggcgcatttccatatgcgctta
acagctcgtcgtggtcgtggttatgttccagcagaagcaaataaaaaagatgacatgcct
attggcgtagtaccaattgattctatttacacacctgtatctagagtaaattatcaagtg
gagaatactcgtgttgggcaagtagcaaactatgataagctaacactagacgtctggaca
gatggaagcatccggccagaagaagcagttgctattggtgcaaaaattctaacagaacac
ttaaatatttttgtcggtcttactgaccaagcacaaaatgctgaaattatggtagaaaaa
gaagaagatcagaaagaaaaagttcttgaaatgacaatagaagaactagatttgtctgtt
cgttcatataactgcctaaagcgtgctggtattaacactgtacaagagctaacacataag
acagaagaagatatgatgaaagttcgaaatcttggacgtaagtctttagaagaagtacaa
gaaaaacttggtgagcttggcttgggacttcgaaaagaggattga
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