Bacillaceae bacterium IKA-2: RJD24_01330
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Entry
RJD24_01330 CDS
T10990
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam00750
Vitamin B6 metabolism
bbam01100
Metabolic pathways
bbam01240
Biosynthesis of cofactors
Module
bbam_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RJD24_01330 (pdxS)
Enzymes [BR:
bbam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RJD24_01330 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
NanE
IGPS
His_biosynth
FMN_dh
IMPDH
TetR_C_27
PcrB
TMP-TENI
DUF4315
Motif
Other DBs
NCBI-ProteinID:
WNF37132
LinkDB
All DBs
Position
complement(232122..233006)
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AA seq
294 aa
AA seq
DB search
MGQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEQAGAVAVMALERVPSDIRAEGGVAR
MADPTITEEVMNAVSIPVMAKCRIGHIVEARILEAMGVDYIDESEVLTPADEIYHLYKRD
FTVPFVCGARDIGELARRIAEGASMVRTKGEPGTGNIVEAVRHMRMIQAQIRKVLTMSTD
ELMTEAKNTGAPFEVLLQIKESGKLPVVNFAAGGIATPADAALMMELGADGVFVGSGIFK
SDNPEKFARAIVEATTHYQDYELIARLSKGLGTAMKGIEISSIHPSDRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaacaggtacagatcgggttaaacgtggtatggctgaaatgcaaaaaggcggc
gtgatcatggatgttgttaacgctgagcaagcaaaaatcgctgagcaagctggtgccgtt
gctgtaatggcacttgaaagagtaccgtcagatatacgtgcagagggcggtgttgctcgg
atggcagatccgacaataactgaagaggtaatgaatgctgtctctattccagtaatggct
aaatgtcgtatcgggcatattgtcgaagcaagaattttggaagctatgggcgtagactat
attgatgaaagtgaagtattgacacctgctgatgaaatttatcatttatataagcgtgat
tttacagttccatttgtatgtggtgctcgagatattggcgaacttgcacgtcgaatcgcc
gaaggtgcttcaatggttcgtacaaaaggtgagccaggaacaggtaatatcgttgaagca
gttcgtcatatgcggatgattcaagctcaaattcgtaaagttctaacgatgtctactgat
gaactgatgacagaagcaaaaaatacgggtgctccatttgaagttttacttcaaattaaa
gaaagtggtaagctacctgttgttaactttgcagcgggcggaattgcaactccagctgat
gcagcgttaatgatggaattaggtgcagatggtgtattcgttggttctggtatttttaaa
tcagacaaccctgaaaagtttgctcgcgcaattgttgaagcaactacgcattatcaagac
tatgaattaattgcccgtttatcaaaaggacttggtacagcaatgaagggaattgaaatt
tctagtatccatccttctgaccgtatgcaagagcgcggttggtaa
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