Bacillaceae bacterium IKA-2: RJD24_01860
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Entry
RJD24_01860 CDS
T10990
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RJD24_01860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_01860
Enzymes [BR:
bbam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RJD24_01860
DNA repair and recombination proteins [BR:
bbam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RJD24_01860
Prokaryotic type
RJD24_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNF37230
LinkDB
All DBs
Position
343379..344053
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AA seq
224 aa
AA seq
DB search
MELLKNDWETLLHDELKKPYYLRLTKFLKKEYATNTIYPNQKEIFNALDSTSYNHTKVVI
LGQDPYHGQGQAHGLSFSVKDGVKQPPSLKNIFKELNSDLGCNIPNHGCLQSWADQGVLL
LNTVLTVRDSAANSHKGVGWEEFTDQIISLLNRREKSLVFILWGRHAQQKKQLLTARHHH
LIESPHPSPLSAHRGFFGSQPFSKTNQFLRLEDYPEIDWDRVNM
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaactgctgaagaatgactgggaaacattgctccacgatgaactcaaaaaaccatac
tatttaaggttaactaaatttctaaaaaaagagtacgctacaaacacgatctatccaaat
caaaaagagatttttaacgccctcgattcgacctcttacaatcatacgaaggttgttatt
ttggggcaagatccttaccatggtcaaggccaagcacacggtttaagcttctctgttaaa
gacggtgtcaagcaaccgcctagtttgaaaaatatttttaaagagctcaatagtgatctt
ggttgtaatattcctaaccatggttgcctccaaagctgggctgatcaaggggttctcctt
ttaaatacagtgctaaccgtgagggatagtgccgctaactcccacaaaggtgttggctgg
gaggagtttactgaccaaattatctcattattaaatagaagagaaaaatcgttagtattt
atactttggggacgtcacgcgcagcaaaaaaaacaactactaactgcgcgtcatcaccat
ctgattgaatcaccacatcctagtccactatctgctcatcgtggcttttttggtagtcag
ccattttcaaaaacgaatcagtttctacgtctcgaggattaccctgaaattgactgggac
cgagtaaacatgtaa
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