Bacillaceae bacterium IKA-2: RJD24_02050
Help
Entry
RJD24_02050 CDS
T10990
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RJD24_02050 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbam03021
]
RJD24_02050 (rho)
03019 Messenger RNA biogenesis [BR:
bbam03019
]
RJD24_02050 (rho)
Transcription machinery [BR:
bbam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RJD24_02050 (rho)
Messenger RNA biogenesis [BR:
bbam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RJD24_02050 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA
Mor
AAA_22
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WNF37266
LinkDB
All DBs
Position
389186..390454
Genome browser
AA seq
422 aa
AA seq
DB search
MGVNLAELENKKLRELYELAKQYKVSYYSKLTKKELVFAILKAQAEEDGLMFMEGTLDIV
SADGFGFLRPINYLPSTEDIYISASQIRRFELRNGDKVSGKVRKPKENERYYGLLHVEAV
NGEEPETAKSRPHFPALTPLYPEERIKLEASQENVSTRIIDLISPVGFGQRGLIVAPPKA
GKTLLIKEIANSISINHPDADLIVLLIDERPEEVTDIERSVNAEVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKNVIILMDSITRLARAYNLVVPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDEVIYEEFKGTGNMELHLDRRLAERRIFPAIDILR
SGTRREELLLPKDQLENLWAIRKTMKDSSEYIEHFIRKVRSTKSNEEFFASIEADKTGKK
TR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaaatttagcagaattagaaaacaagaaactgcgtgagttatatgagttagca
aagcaatacaaagtatcatattacagtaaattaacaaaaaaagagttagttttcgctatt
ttaaaagcacaagctgaagaagacgggcttatgtttatggaaggaacgctagatatcgtt
tctgctgatggcttcggattcttacggcctattaattacttgcctagcaccgaagatatt
tatatttcagcatcacaaattcgcagatttgagttaagaaatggtgataaagtatcgggt
aaggttaggaaaccaaaagagaatgaacgttattacggattactccatgttgaagcagta
aatggagaagaaccagaaacagccaaaagtcgtcctcactttcctgcccttacaccttta
tatcctgaagaaagaattaagttagaagcatctcaagaaaatgtttctacgcgaatcatt
gatttaatttcccctgtcggttttggtcagcgtggattaattgttgcaccgccaaaagcg
ggtaaaacgttactcataaaagaaatcgctaacagtatatcgataaaccaccctgatgca
gatttaattgttctcttaattgacgagcgtcctgaggaagttactgatattgagaggtct
gttaatgctgaagtagtaagctcgacttttgatgaagtacctgaaaatcacattaaagtt
gccgagcttgttcttgaaagagctatgcgtctagtcgaacacaagaaaaatgtcattatt
ttaatggatagtattactcgcttggctcgagcctataacttagtcgttccaccgagtggt
agaacgttatctggtggtattgatccagctgcatttcatcgtcccaagcgcttttttgga
gcagcaagaaatattgaagaaggcggaagcttaactatcttggcaacggcgctagttgat
acaggctctcgaatggacgaagtaatctacgaagagtttaaaggaactggaaacatggaa
ctacatcttgaccgccggcttgcagaaagacgtattttcccagccatcgatatcttgcgt
tcaggtacgagaagagaagaactacttttaccgaaagatcagctggaaaacttatgggca
attcgcaaaacgatgaaagattcatcagaatacatcgaacactttattcgtaaagttaga
tcaactaagtcaaatgaagaattttttgcatcgattgaagcagacaaaacgggtaaaaaa
actcgataa
DBGET
integrated database retrieval system
