Bacillaceae bacterium IKA-2: RJD24_06695
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Entry
RJD24_06695 CDS
T10990
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RJD24_06695 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbam03019
]
RJD24_06695 (recQ)
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_06695 (recQ)
Enzymes [BR:
bbam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RJD24_06695 (recQ)
Messenger RNA biogenesis [BR:
bbam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RJD24_06695 (recQ)
DNA repair and recombination proteins [BR:
bbam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RJD24_06695 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WNF38110
LinkDB
All DBs
Position
1342558..1344342
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AA seq
594 aa
AA seq
DB search
MFEKKLHSLSPIDVLKKYYGYDRFRRNQEEIITSIFERKDTFCIMPTGGGKSVCYQVPAI
LLKGLTIVISPLISLMKDQVDTLTSNGIPAVYLNSTVTYSNQELIMKDIRQGKYKLVYVA
PERLDSNQFLHFLKQLPIEFIAIDEAHCISQWGHDFRPSYRKIGALIEQLSPRPVIAAFT
ATATKEVAEDIKRGLALQSPLSFVSGYERENLAFSVVKTGNKRKYLLDFLKRYKGESGII
YTATRKDVESLQLFLAKNGIQAVTYHAGMAERVRNDHQEKFIYDDEKIIIATNAFGMGID
KSNVRFVIHYQLPKSMEAYYQEAGRAGRDGENSECIVFYTSKDVQTQKFLIEQSQSDEER
KSREYRKLQMMVDFCHTTKCLQSFIVAYFGDILERECSKCSNCLSDFEEIDVTIEAQKIF
SCVVRMKERFGVTLIAQVLKGSQNKRIKQLSLTELSTYGIMNKKTEKGISELIQLLIAEG
YLGLKNGQYPTVRMTEKAADVLKNGSKVLQKLKPVKKEAVVHSELFELLRQIRRDIAEKE
KLPPYIIFSDATLREMCQYYPKTKLEMLQIKGVGEVKYEKYGQVFLNEISQFSE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaaaaattacattcgctttcaccaatcgatgtcttaaaaaaatattatggt
tacgacagatttagacgaaatcaagaagaaattattacatctatatttgaaagaaaagac
actttttgcattatgcccacaggcggcgggaaatcggtctgctatcaagtgccggcaatt
cttttgaaaggactaacgattgttattagtccattaatctctttaatgaaagatcaagtt
gatactttgactagtaatggaataccagcagtttatttaaatagtacagtgacttattca
aatcaagaacttattatgaaggatattagacaaggaaaatataaacttgtttatgtcgca
ccagagcggctcgattctaatcagtttttacattttttgaaacagttaccaatcgagttt
attgccatagatgaagcccactgcatttcccaatggggacatgattttcgtccaagttac
agaaaaataggggctttaattgaacagctatcacctcgtccggtaattgcggcttttact
gcgacggcgacaaaagaggttgctgaggatattaaaagaggactagcacttcaatctcct
ttatcgtttgtttctggttatgaaagggaaaacctagctttttctgtcgtgaaaacaggt
aacaagaggaagtatttactagattttttaaagcgttacaaaggcgaaagcggaataatt
tatactgccactagaaaagatgtcgaaagcttacagctctttttagctaaaaatgggatt
caggcagttacctatcacgcgggcatggctgagcgtgtccgtaatgaccatcaagaaaaa
tttatttatgatgatgaaaaaataattattgccacaaacgcatttggaatgggtattgat
aaatcaaatgttcggttcgtgatccattatcaactacctaagagcatggaggcttactat
caagaagccggcagggctgggcgagacggagaaaatagtgaatgcatcgtattctatact
agtaaagatgtccaaacacaaaagtttttaattgaacagtcacaatcagacgaagagcgg
aaatcacgtgaatatcgaaaactgcaaatgatggtagatttttgtcatacgacaaaatgt
ttacaaagcttcattgttgcttattttggggacatcctagagcgagagtgtagtaaatgt
tcaaattgtttatcggatttcgaggaaattgatgtcacgattgaagcacagaaaattttt
tcttgtgttgttcgaatgaaggaaagatttggtgttaccctaattgctcaagttcttaaa
ggatctcaaaataaacgaattaaacaattgagcttaacggaattaagtacatatggaatt
atgaacaaaaaaacggaaaaaggaattagtgaactgattcaacttttgatcgctgaaggc
tacttaggattaaaaaacggtcaatatcctactgtaagaatgactgaaaaagctgctgat
gtcctaaagaatggttcaaaggttttacagaaattaaaaccggttaaaaaagaagcggtt
gttcacagtgaactttttgaactgcttcgccagatccgaagagatatagctgaaaaggaa
aagctaccaccgtatattatcttttctgacgcaacattaagagaaatgtgtcagtattac
cctaaaacgaaactagaaatgctccaaatcaaaggagtaggggaagtaaagtatgagaag
tatgggcaagtatttttaaatgaaataagtcagttttcagaatga
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