Bacillaceae bacterium IKA-2: RJD24_07275
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Entry
RJD24_07275 CDS
T10990
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03030
DNA replication
bbam03430
Mismatch repair
bbam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RJD24_07275
03430 Mismatch repair
RJD24_07275
03440 Homologous recombination
RJD24_07275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbam03032
]
RJD24_07275
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_07275
Enzymes [BR:
bbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RJD24_07275
DNA replication proteins [BR:
bbam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RJD24_07275
DNA repair and recombination proteins [BR:
bbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RJD24_07275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WNF38220
LinkDB
All DBs
Position
1468286..1469020
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AA seq
244 aa
AA seq
DB search
MNMNEMMQFIKQIPGKLGSNKYSSVANQKDPQNVAFLRQLQREIKKHDVMEVPFSKLNLV
VFDLETSGFHPYKGDRILSIGAVKVIEGSVLDTERFYSLVYSEADVSPEIETLTGITKGD
LLSAPPIETVLTDFFRFIKSDPLVAHHANHERSFMQHIMWYQLKSRFEHRIIDTSFLTKI
AHPKATYVTLDDWCGHYCIENEKRHHALYDALATANLWVKSVSEVQKLGFQHLKDVYTHL
ARIQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaatgagatgatgcaatttattaaacaaatacctggaaagttgggttcaaat
aagtattcatcagtggcgaaccaaaaggatcctcaaaacgttgcctttcttcgccaattg
caacgagagataaaaaagcatgatgttatggaagttccattttctaaattgaatctagtg
gtctttgatttagagacgtctggctttcacccttataaaggggatcggattttatcgatc
ggtgcagtaaaagttattgaaggaagcgttttagatacggagcgcttctattctttagtt
tatagtgaagctgacgtttctcctgaaattgagaccttaacaggaattactaaaggtgat
ttgttatctgcaccaccaattgaaacagtcttaacagatttttttcggttcattaaaagt
gatccactagttgctcaccacgctaatcatgaacgaagttttatgcaacatataatgtgg
tatcaattgaaaagtcgctttgaacatcgaattatcgatacatcttttttaacgaaaatt
gctcatccaaaagcaacttacgtaacattagatgattggtgtggtcattattgtattgaa
aatgaaaaaaggcatcatgcactttatgatgctttagcgacagcaaatttatgggttaag
tcggttagtgaagtacaaaagttaggttttcagcatttgaaagatgtctatacacattta
gcgagaattcaatag
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