Bacillaceae bacterium IKA-2: RJD24_07290
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Entry
RJD24_07290 CDS
T10990
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03018
RNA degradation
Brite
Enzymes [BR:
bbam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RJD24_07290
Messenger RNA biogenesis [BR:
bbam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RJD24_07290
Ribosome biogenesis [BR:
bbam03009
]
Prokaryotic type
rRNA helicases
RJD24_07290
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNF38223
LinkDB
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Position
1471168..1472370
Genome browser
AA seq
400 aa
AA seq
DB search
MADFSKLGIGSELVQIVKKNGIQSPTTIQELAIPIILNGEDVIAQAQTGTGKTLAFLLPI
LEKINRPKREVQALIITPTRELALQITAEVEKLIKNIESVNVLSIYGGQDVEKQIKKLKK
ATQIVVATPGRLLDHLRRGTINLEQVSMLVIDEADQMLHMGFLIEIKTIIQHVEHDRQTM
LFSATMPKEIHQLAEQYTNNPKTIHVKSEQITVEKIKQIVIETTDRQKQPMLITLIKQYQ
PFLAIIFCRTKLRAIKLNDALKTNGFLSDELHGDLSQAKRENVMKRFRDLKLQLLVATDV
AARGLDVEGITHIFNYDIPEDVESYVHRIGRTGRAGDEGIAITLVAPKDRNYLTIIEKGI
NMTVEKVAMEIPKGQMQTNQGENPYLTEKQKRKERTRSNQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ttggctgatttttcaaagctaggtatcggatctgagttagttcaaatagttaaaaaaaat
ggcattcaaagcccaacaacaattcaagagcttgcaatcccaatcattttaaatggagaa
gatgttattgctcaggctcaaacaggaacaggcaagacgttagcatttcttttaccgatt
ttggaaaaaattaatcgtccaaaaagggaagttcaagcactaattatcacaccgacaaga
gagttagctctacaaattactgctgaagttgaaaaattaattaaaaacattgaaagtgtg
aatgtcctttctatttatggcggtcaagatgtagagaaacaaattaaaaaattaaaaaag
gcaacacaaatcgttgtcgcaaccccaggcagattattagaccatctgcgccgtggaaca
atcaatttagagcaggtatcgatgttagtaatagatgaagcagatcaaatgctccatatg
ggatttttaatagaaattaaaacgattattcagcatgtagaacatgatcgtcagaccatg
cttttttcagcaacaatgccaaaggaaattcatcaactggcagagcagtatacgaataac
cctaaaactattcacgtcaaaagtgaacaaataactgttgagaaaattaaacaaattgtt
attgaaacaacggatcgtcaaaagcaaccaatgttgataaccttaataaaacaatatcaa
ccgtttttagcaattattttttgtcgaacaaaacttagggcaattaagttaaacgatgct
ttaaaaacaaatggttttctttctgacgagcttcatggcgatttatcacaagcgaagcga
gaaaacgtcatgaaacgatttcgagatctaaaattgcagttactagttgcaacagacgtt
gctgcacgaggtttagacgtagaagggataacccatatttttaattatgatatcccagaa
gatgtagaaagctacgttcatcgcattgggcgaaccggacgagcaggtgatgaaggtatt
gcgataacattagttgcaccaaaagaccggaactatttaactataattgaaaaagggatt
aacatgactgtcgaaaaagtagcgatggagattccgaaaggacaaatgcaaacgaaccaa
ggagaaaacccttatctgactgagaagcagaaaagaaaggaacgtacgcgaagtaatcaa
tag
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