Bacillaceae bacterium IKA-2: RJD24_09700
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Entry
RJD24_09700 CDS
T10990
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bbam Bacillaceae bacterium IKA-2
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_09700
Enzymes [BR:
bbam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RJD24_09700
DNA repair and recombination proteins [BR:
bbam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RJD24_09700
Prokaryotic type
RJD24_09700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WNF38667
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All DBs
Position
complement(1978110..1979555)
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AA seq
481 aa
AA seq
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MQKTIIWFRKDLRIHDHQALSEAAKRGIVIPIFIWSKEEEQDSIVNSPSLWWLHHSLLAL
QQTFQEKYGISMIIRTGTSLEVLKDIVQETKADAVYFNERYEPEMIALEKEIIRKLTIDK
IEIRTFHSQLVFNPYSVFNLSGDPYKIFTPYWKKCLKESIPKPFPIPRSIQADIQEISTL
SVEQLNLISTIRCHKKLHQYWTPGENGAISAWKKFIDNGLDNYKIGRDFPHLNEVSRLSA
HLAWGDISPKAIWYSADHHLQTSENIGCQVQLEEQIEAFKRQLVWRDFGYHQLIHFPTIT
HKPLREQFQSFPWEDNQQDFINWKNGTTGYPFIDAGMRELRETGTIHNRVRMVVASFLVK
HLLIPWTKGALWFQDTLVDFDLANNSIGWQWASGCGLDSAPYFRIFNPMIQSEKFDKNGD
YIRLWIPELAELPSPYIHRPWDAPEHILISANITLGETYPHKIIEHDFARKRALAGYDMI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaccattatttggtttcgaaaagatcttaggatacatgatcatcaagcattg
tcggaagcagccaaaagaggaattgtcattcctatttttatttggtctaaagaagaagag
caagactcgatcgtaaactcaccttctttatggtggctgcatcattctctacttgcactc
caacaaacatttcaagaaaagtatggtatttctatgattattcgaaccggtactagttta
gaggttcttaaagatattgttcaagaaacgaaagcagatgccgtctattttaatgagcgc
tatgaaccagaaatgattgcactagaaaaggagatcattcgtaaacttactatcgataaa
attgaaatacgtacgtttcattcccagcttgtcttcaatccatatagcgtctttaattta
agtggagatccttataaaatctttactccttattggaaaaaatgtttaaaagaatcaatc
cccaagcctttcccgatcccacgttctatacaagccgatatccaagaaatttcaacattg
tcggtagaacagctaaatctcatctcaacaattcgttgccataagaaacttcaccagtac
tggactccgggtgaaaatggtgctatttcagcatggaaaaaatttattgataacgggctt
gacaactataaaatcggacgagatttccctcatttaaatgaagtttctcgtctctcagct
catcttgcatggggagatattagtccgaaagcaatttggtattcagctgatcatcatctc
caaacctcagaaaatataggttgtcaggtacaattagaagaacagattgaggcgtttaaa
agacagctagtatggcgagattttggttatcatcaactcattcactttccaaccatcaca
cacaaaccgctgcgagagcagttccagtcatttccgtgggaagataatcaacaagacttt
ataaactggaaaaatggtacgactggctatccattcatcgatgctggtatgagagaactt
cgggaaacaggaacgatccacaaccgtgtccgtatggtcgttgcctcttttttagtcaaa
catttactaatcccctggacaaaaggtgccctctggtttcaagatactctcgttgatttt
gacttggctaataattcaattggatggcaatgggcatctggctgcggtttagattcagca
ccctatttccggatttttaatccaatgattcaaagtgaaaaattcgataaaaatggcgac
tatattcggctgtggatcccagaattagcggagctcccttctccttatatccaccgccct
tgggacgcacctgaacatattctaatctcggcgaacatcactctcggcgaaacgtatcca
cataaaattattgagcatgatttcgctagaaaacgtgcattagctggatatgatatgatt
aaatga
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