Bacillaceae bacterium IKA-2: RJD24_16170
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Entry
RJD24_16170 CDS
T10990
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam00020
Citrate cycle (TCA cycle)
bbam00190
Oxidative phosphorylation
bbam00650
Butanoate metabolism
bbam00720
Other carbon fixation pathways
bbam01100
Metabolic pathways
bbam01110
Biosynthesis of secondary metabolites
bbam01120
Microbial metabolism in diverse environments
bbam01200
Carbon metabolism
Module
bbam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bbam_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RJD24_16170 (sdhB)
00650 Butanoate metabolism
RJD24_16170 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
RJD24_16170 (sdhB)
00720 Other carbon fixation pathways
RJD24_16170 (sdhB)
Enzymes [BR:
bbam01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RJD24_16170 (sdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4_9
Fer4_10
Fer4_17
Fer4_16
Fer4_2
Fer4
Fer4_21
Fer4_4
Fer4_3
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
WNF35972
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All DBs
Position
complement(3331049..3331810)
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AA seq
253 aa
AA seq
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MSEKTIRFIITRQADTNSAPYKEEFEIPYRENMNVISALMVLQRNPVNSSGAKSTSVTWD
MSCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLEPMRTFPVVRDLIVDRTRMFESLK
KVKAWIPIDGTYDLGPGPRMAEGKRQWAYELSKCMTCGVCLEACPNVNSGSPFIGPAPLS
QVRLFNAHPTGEMNKAERLETIMGEGGLANCGNSQNCVQACPKGIPLTTSIAALNRDTTV
QSFMNFFGSDNNI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaaacgattcgatttataatcactcgtcaagcggatacaaattcagcgcca
tataaagaagaatttgaaataccttatcgtgagaatatgaacgttatttctgctcttatg
gtattgcaacgaaatcctgtaaattcatcaggagcaaagtctacatcggttacatgggat
atgagctgtttagaagaggtttgtggcgcctgttcgatggtgatcaatggaaaaccacgc
caatcctgtacagcgttaattgaccaattagaacaaccgattcgcttagaaccaatgcga
acgttcccagttgttcgtgacttaattgttgatcgtacacgaatgttcgaatcattaaaa
aaagtaaaagcatggataccaatcgacggtacgtatgacctaggtcctggaccgagaatg
gctgaaggaaaacgccaatgggcatatgaactttctaaatgtatgacttgtggcgtgtgc
ctagaagcgtgtcctaatgtaaatagtggctcaccatttattgggccagctccgttatca
caggttcgcctattcaacgcacatccaacgggtgaaatgaataaagcagaacgccttgag
acaattatgggtgaaggcggtttagcaaactgtggtaactcccagaactgtgttcaagca
tgtccaaaaggaattccattaacaacatcaatagcagcactaaatcgcgatacaacagtt
caatcatttatgaatttctttggtagcgacaataatatttaa
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