Bacillaceae bacterium IKA-2: RJD24_16175
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Entry
RJD24_16175 CDS
T10990
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam00020
Citrate cycle (TCA cycle)
bbam00190
Oxidative phosphorylation
bbam00650
Butanoate metabolism
bbam00720
Other carbon fixation pathways
bbam01100
Metabolic pathways
bbam01110
Biosynthesis of secondary metabolites
bbam01120
Microbial metabolism in diverse environments
bbam01200
Carbon metabolism
Module
bbam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bbam_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RJD24_16175 (sdhA)
00650 Butanoate metabolism
RJD24_16175 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RJD24_16175 (sdhA)
00720 Other carbon fixation pathways
RJD24_16175 (sdhA)
Enzymes [BR:
bbam01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RJD24_16175 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
DAO
Trp_halogenase
ARM_LIN_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WNF35973
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Position
complement(3331807..3333576)
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AA seq
589 aa
AA seq
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MSTGKIVIVGGGLAGLMAAIKAAEAGFQIDLFSVVPVKRSHSVCAQGGINGAVNTKGEGD
SPALHLDDSVYGGDFLANQPPVKAMCDAAPGIINLMDRMGVMFNRTPEGLLDFRRFGGTQ
VHRTAFAGATTGQQLLYALDEQVRRFETKGLVKKYEGWEFLSAIIDDEGICRGIVAQNLT
TSEIEHFKGDAVIVATGGPGIVFGKSTNSMINTGYAAAKLYEQGVYYANGEFIQIHPTSI
PGEDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAFGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPKELDIKLGGIMEIYEKFMGDDPRKVPMKIFPGVHYSMGGLWV
DFDQMTNIPGLFAAGEVDYSQHGANRLGANSLLSAIYGGMVAGPNAVKYINNLEIKSDDV
SASIFESHTKEAQENFDSILKMNGTENAYQIHKELGELMTENVTVVRINERLIETDAKIV
ELMERYKNININDTAKWSNQGVAFTRQLEGMLNLARVITLGALNRNESRGAHYKPEFPER
NDEEWLKTTKAKYNAEKNAPEFEYEEVDISLIPPRKRDYSTTKKVSEKK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggaaaaattgtcatagttggtggtggccttgcaggtttaatggctgctata
aaagcagctgaagcgggttttcaaatagatttattttcagtagtaccagttaaacgatct
cactctgtttgtgcccaaggtggcattaacggagctgtaaatacaaaaggtgagggtgat
tcacctgcattgcacctcgatgattcagtttacggtggagactttttagctaaccaacca
ccggtaaaagcaatgtgtgatgcagcgccaggaattattaatttaatggatcgtatggga
gtcatgtttaataggactccagaaggtttactagattttcgccgattcggtgggactcaa
gtccatcgtactgccttcgcaggagcaacaactggtcagcagttattatatgcattagat
gagcaagttcgtcgttttgaaacaaagggacttgttaaaaagtacgaaggttgggaattt
ttatcggcgattattgatgatgaaggaatttgtcgagggattgttgctcaaaatttaact
acttctgaaatcgaacattttaaaggtgacgcagttatcgttgcaacaggtggccctggt
attgtttttggaaaatctacaaactcaatgattaatacaggatatgctgctgcaaagcta
tatgaacaaggcgtatattatgccaatggtgaattcattcaaattcatccaacatcaatt
ccaggtgaggacaaacttcgccttatgagtgaaagtgctcgtggagaaggtggacgtatt
tggacgtataaagatggtaaaccatggtactttttagaagaaaaatatcctgcttttggt
aaccttgtacctcgtgacatagcaacaagagaaatttttgacgtttgtgttaatcaaaaa
ttaggtatcaatggagaaaatatggtttacttagatctttcacataaagatcctaaggaa
ctagatattaaacttggtggtattatggaaatttatgagaagttcatgggtgatgatcct
cgtaaagtgccaatgaagatttttccaggtgttcattattcaatgggtggtctatgggtt
gatttcgatcaaatgactaatattcctggtttgtttgcagctggtgaagtagattattct
cagcatggtgctaatcgtttaggggcaaattcgcttctttctgcaatttatggcggcatg
gtagcaggacctaatgcagttaaatacattaataatttagaaataaaatctgatgatgtt
tcagcatcaatttttgagagccatacaaaagaggcgcaagaaaattttgattctatttta
aaaatgaatggtacagaaaatgcctatcaaattcacaaggaacttggcgagttgatgaca
gaaaatgtaaccgttgttcgtataaatgagcgtctcatcgaaacagatgctaaaatagtc
gaattaatggaacgttataaaaacattaacattaatgatacagcaaaatggagtaaccaa
ggtgtggcctttacacgtcagctcgaaggtatgcttaatttagctcgtgttattacactt
ggagccctcaatcgtaacgaaagtcgtggagcccattataaaccagaatttccagaacgt
aatgatgaagaatggttaaagacgacaaaggcaaaatacaacgcggagaaaaatgctcct
gaatttgaatatgaagaagttgatatttctctaataccaccgagaaaacgagactactca
actacaaagaaagtgagtgagaaaaaatga
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