Bacillaceae bacterium IKA-2: RJD24_16435
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Entry
RJD24_16435 CDS
T10990
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RJD24_16435 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_16435 (mutM)
Enzymes [BR:
bbam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RJD24_16435 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RJD24_16435 (mutM)
DNA repair and recombination proteins [BR:
bbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RJD24_16435 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WNF36024
LinkDB
All DBs
Position
complement(3388972..3389808)
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AA seq
278 aa
AA seq
DB search
MPELPEVETVKLTLQQLVIGKTIKEITVHWGKIIKLPDDVAEFCHLLEAQTIINVERRAK
FLKIFFNDYVLLSHLRMEGRYGMFSEGEPIDKHTHVIFQFTDGTELRYQDVRKFGTMHLF
LKGEEDSSLPLAQLGIEPFDEKFSPKMLKQLFQGTNRKVKVTLLDQTKLVGLGNIYVDEA
LFRSCIYPERIGKDLTLKEIKKLHLEIKATLKEAIDMGGSSVKSYVNGQGEMGMFQQQLF
VYGRKGEPCKVCGWAIEKIIVGGRGTHYCPKCQGKRGK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtagaaaccgttaagctaacgttgcagcagcttgttattgga
aaaacaattaaggaaattaccgttcattggggaaaaataattaaacttcctgatgatgta
gcagagttttgtcatttacttgaggctcaaacaattattaatgttgaaagacgggctaaa
ttcttaaaaatattcttcaatgactatgttcttttatcacaccttcgtatggaaggtcgt
tacggtatgttttccgagggagaaccaatcgataaacatactcacgttattttccagttt
acagatggaacagagcttcgctatcaagatgtaaggaaatttggaacgatgcacttattt
ttaaaaggagaggaagactcttcgctccctttagcacaattaggaattgaaccttttgat
gaaaagttcagtcccaaaatgctcaaacaattgtttcaaggaacgaatcgtaaagtcaaa
gtaactttgcttgatcaaacaaaacttgttggtttagggaatatttatgttgatgaagcg
ttatttcgctcttgtatataccctgaacggatcggcaaagatttaactttaaaagaaatt
aagaaattgcatctagaaataaaagctaccttaaaagaagccatcgatatgggaggaagt
tctgtaaagtcttatgtaaatggccaaggtgagatggggatgtttcaacaacaacttttt
gtttatggtcgaaaaggagaaccttgcaaagtttgcggttgggcaattgaaaaaattatt
gttggtggcagagggacgcattactgcccgaaatgtcaggggaaaaggggaaagtag
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