Bacillaceae bacterium IKA-2: RJD24_16530
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Entry
RJD24_16530 CDS
T10990
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03030
DNA replication
bbam03430
Mismatch repair
bbam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RJD24_16530
03430 Mismatch repair
RJD24_16530
03440 Homologous recombination
RJD24_16530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbam03032
]
RJD24_16530
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_16530
Enzymes [BR:
bbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RJD24_16530
DNA replication proteins [BR:
bbam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RJD24_16530
DNA repair and recombination proteins [BR:
bbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RJD24_16530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WNF36041
LinkDB
All DBs
Position
complement(3412189..3415557)
Genome browser
AA seq
1122 aa
AA seq
DB search
MDFVHLHINTEYSLLKSAAKISTLVKRAKELKFSALAITDQNVMYGVIPFYKACKLAGIK
PIIGLELFVIGKDKAESRLLLLAKNSQGYQNLLKLSSIAQILPTNQKKQIEKKYLFQYSE
GLIAISSAYKGEIQQCLAYGEKEQALNLIQQYKESFGDDFYIGIHNHFLAEEKKLNLDLL
DLAKNGICNLVATNQVMYVNKDDSLAHKCLLAIEQGTTLKELNSDFRTEEYYIKSQVEMA
ELFSFVPDAMINTTLIAAQCNVELEFGGQTLPKYPLPNQGNPKQFLENLCFEGLKKRYLV
RTKKLEERLLYELRIIDQMKFNDYFLIVWDFMKFAHDKKIITGPGRGSAAGSLVAYVLNI
TNVDPIKYDLIFERFLNPERVSMPDIDIDFSDTRREEVIEYVFKKYGKNHVAQIITFGTL
AAKAALRDVGKVIGIPISQIDLIAKQIPSRPNLTIEDAVRETTTLKKQVNENEEIKEWFQ
LAQRVEGIPRHSSTHAAGIVISEDPLSDKVPLQKGHHNVLLTQYPMNTLEELGLLKMDFL
GLRNLSFIEEIVNHVIAMEGKKIELDKISFDDENTFKLLSKGDTTGIFQLESQGMRRVLA
NLKPTEFEDIVAVNALYRPGPMENIPLYIEGKHKKRQVVYVHNDLKPILEKTYGVIVYQE
QIMQIASKMAGFSLGEADILRRAVSKKKLETLEEQREKFVQGCLKLEYEKKVANTVYDLI
VRFANYGFNRSHSVAYSVISYQLAFLKANYPTAFFAALLTSGIGQQQKINEYIIDAKKKA
ITIGYPSINKSSAQFTVLKKGKIQFGLAALKNIGLRAIEEITKMRKDTGPYQDIFDFCAR
VSSKHINRRTLEALVSAGCFDELGHHRAGLLATLDYAQEYGEKVKQFQENQQTAFFTEEI
TLPDLIQVPPFKETEKLYFEKEVIGFYLSSHPIEAFADLLKSHKRILISESLLKEDGYVT
RIGGLVETVRRIKTKKGEQMAFLKLSDESGDINVTIFPKIFQQHRSVFQEGELAFLEGKL
EVSESRLQLVVRKAIDIKSLSKKIENKIILYLKIVQDKSSSMQLIKLKENLKNFPGNVQI
ILYYEGKKQSIQLSDDFNVTPSNQCLETLYLMLGKENVVLKG
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtggattttgtacatttacacataaatacggagtatagcctgttaaaaagtgcggcaaaa
atcagcacacttgtaaaacgagcaaaagaactgaaattttctgcccttgcgattaccgat
caaaatgtgatgtacggggttatcccgttttacaaagcttgtaaattagctggaattaaa
cctattatcggactagaactatttgttattggaaaagataaagctgaatcaagactatta
ttgcttgccaaaaatagtcaaggctatcaaaacctcctaaaattgtcgagcatcgcccaa
attttaccgactaatcaaaaaaaacagatagaaaagaaatatttatttcaatattcagaa
ggactcattgcaataagttcagcctataaaggtgaaatccaacaatgtttggcatatggg
gagaaagaacaagccttaaatttgattcaacagtataaagagtcattcggtgacgatttt
tatataggtatacataatcattttttggctgaggaaaaaaaattaaacctcgatttgctt
gatctcgccaaaaatggaatttgcaacttagttgctactaatcaagtcatgtacgtcaat
aaagatgattcactagctcataaatgtttactagctattgaacaagggacaacgttaaag
gaacttaacagtgattttcgtacagaggagtattacataaagtcccaagttgaaatggct
gaacttttctcatttgttcccgatgcaatgatcaacactacgcttatagctgctcaatgt
aatgttgagttagaatttggtggacagacgttaccgaagtacccgttaccaaatcagggg
aacccaaagcagtttttagagaatctttgtttcgaaggcctgaaaaagcgttacttagtt
agaacaaaaaaactagaggagcgacttctttatgaacttcgtatcattgatcaaatgaag
tttaacgactactttttaatagtttgggactttatgaagtttgctcatgataaaaaaatc
attactggtcctggacgtggttccgcagctggctctcttgtcgcatatgtactaaatatc
acgaatgtagatccaattaaatatgatttaatttttgagcgttttctaaatccagaaagg
gtttcaatgcctgatatagatattgatttttcagatactcgacgggaagaagtaattgaa
tacgtttttaaaaaatatggtaagaatcatgtcgcccaaattataacgtttggaacactt
gcagcaaaagcggcactaagagatgttggaaaagttattggaattcccattagtcaaatt
gatttaattgctaagcaaattccatctagacctaatttaacaatagaagatgctgttcgt
gaaacaactacactaaaaaagcaggtaaatgaaaacgaagaaattaaagagtggtttcaa
cttgcacaaagggttgaaggtattcccaggcattcttcaacgcatgctgctggaattgtc
attagcgaagaccctttatcggacaaagtccctttgcaaaaaggacatcataatgtgcta
ttaacccaatatccaatgaatacattagaagagcttggattattgaaaatggattttctt
ggtttgagaaatctttcttttattgaagagattgtcaaccatgttattgccatggaagga
aaaaaaattgaattagacaaaatttcatttgatgatgagaacacgtttaagttactaagc
aagggtgatacaacagggatctttcaacttgaatcacaaggtatgagacgcgtgctagca
aatttaaaaccaacagaatttgaagatatcgttgctgtgaatgcgttgtacagaccagga
ccaatggagaatattcctctttatattgaagggaaacataagaagcggcaagtcgtctat
gttcacaatgatttaaaaccgattttagaaaaaacttatggagtaatcgtttaccaagag
caaattatgcaaatagcttcgaaaatggcagggttttcactaggtgaagcagatatttta
aggcgagcagtaagtaaaaagaagttagaaacattagaagaacaaagggaaaagtttgtt
caaggttgcttgaaactagaatatgaaaaaaaagtagcgaatacggtttatgacctaatt
gtacgttttgctaactatggctttaatcgcagtcactctgtggcttatagcgtgatctct
tatcaactggcttttttgaaagccaattacccaacggcattttttgcggccttgcttaca
agcggaattggtcaacagcaaaagattaacgaatatattattgacgcgaaaaagaaagcg
attacgattggatacccatctatcaataaaagtagtgcgcaatttactgttttgaaaaag
ggcaaaattcaatttgggctagccgcacttaaaaatattggcttaagagccattgaagaa
attactaaaatgcgaaaagatacgggtccctatcaggacatctttgatttttgcgcgaga
gttagtagtaagcatataaacaggagaacgttagaagcattagtttcagcggggtgcttt
gacgaactaggacaccaccgagcaggcttactagcaaccttagactatgcccaagaatat
ggagagaaagttaagcaatttcaggaaaatcagcagacagctttttttactgaagaaata
acattaccagatttaattcaagtcccaccatttaaagaaacagaaaaactttattttgaa
aaagaagtaataggtttttatttatctagccatcccatcgaagcttttgctgacttactt
aaatcccataaaagaatcttaatttctgaatctttattaaaagaagatggttatgtgact
cggattggcggccttgttgaaacagtcagaaggataaaaacaaaaaaaggagaacaaatg
gcttttctaaaactaagtgatgagagtggtgatattaatgtaacaatttttccaaagata
tttcagcaacatcgttctgttttccaggaaggagaacttgcttttttggaagggaaatta
gaagtttctgaatcaagattacaattggttgttagaaaagcaattgacataaaaagtctt
tccaaaaaaattgaaaataaaattatcttatatttaaaaattgttcaagataaatctagc
tcgatgcagttaataaaactaaaagaaaacttgaaaaattttcccggaaatgtgcagata
atactttattatgaggggaaaaagcagtcgatacaattatctgatgactttaacgtaacc
ccatcaaatcaatgtttagagacgttatatttgatgctcggaaaggagaatgttgtcttg
aaggggtaa
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