Bacillaceae bacterium IKA-2: RJD24_21145
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Entry
RJD24_21145 CDS
T10990
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam03420
Nucleotide excision repair
bbam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RJD24_21145 (pcrA)
03430 Mismatch repair
RJD24_21145 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbam03400
]
RJD24_21145 (pcrA)
Enzymes [BR:
bbam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RJD24_21145 (pcrA)
DNA repair and recombination proteins [BR:
bbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RJD24_21145 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RJD24_21145 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WNF36869
LinkDB
All DBs
Position
complement(4348957..4351206)
Genome browser
AA seq
749 aa
AA seq
DB search
MSVQSMLDGLNEEQRQAVKQTDGALLIMAGAGSGKTRVLTNRIAYLIKEKEIAPWSILAI
TFTNKAAKEMKERVKKIIGPVANDVWISTFHSMCVRILRRDIDRMGIKSSFTILDPGDQV
SVIKLILKQKNIDSKKFEPKSLLGSISSAKNELKTVKDYAKTAKGPYESTVLDVYEAYQK
ELRKNHALDFDDLIMSTIQLFKQIPEVLQFYQRKFQYIHVDEYQDTNKAQYMLVKMLADR
YKNICVVGDSDQSIYRWRGADITNILSFEGDYPNSKTIMLEQNYRSTKIILQAANDVINN
NLNRKPKKLWTDSQGGENISFFVGDNEHDEAYFIVGKIKELMKQHDYKLSDIAILYRTNA
QSRVIEELLVKSNINYSIVGGTKFYDRKEIKDILAYLSLVANPDADISLRRIINVPKRGI
GATTVEKIAQFALSQELSIFQALQEIEQTGLGDRVTKKLVDFSDQMLGWVQLQQYVSVTE
LVEELLEKTGYRDMLKNDKTIEARTRLENIEEFLSVTQDFESKSDDKSLVAFLTDLALIS
AIDKLDEDENEEKESEQVLLMTLHSAKGLEFPVVFLIGMEEGVFPHSRSLFEEEEMEEER
RLAYVGITRAEQRLYLSCAKMRTLYGRTTMNPRSRFIAEIPSDIVESLNEQKEAPAWSKT
SRLMPSDNIGGKAAPRRKMTSAISPQITTTGGDKFTWQVGDKAEHKKWGVGTVVSVKGSI
ENVELDIAFPQPIGIKRLAAKFAPITKKS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacaatcaatgttggatggattaaacgaagaacaaagacaagcggtcaaacaa
actgatggcgcactattaattatggcaggtgcgggttcggggaaaacgagggtactgacg
aaccgaatcgcttatttaattaaagaaaaagaaattgccccgtggtcaattttggcgatt
acattcacaaataaagctgcaaaagaaatgaaagaacgtgtcaaaaaaattattggtcca
gtggccaacgatgtttggatttcaacatttcactctatgtgtgtacggattttacgaaga
gatatcgaccgaatggggattaaaagtagttttacaattttagacccaggagatcaggta
tcggttattaagctaatcttaaagcaaaaaaatattgattcaaagaaatttgaaccaaaa
agcctattaggtagcattagtagcgcaaaaaacgaactaaaaacagtcaaagactacgcg
aaaactgccaaaggtccttatgaatcgaccgtattggatgtttatgaagcttatcaaaaa
gagcttcgcaaaaatcatgcattggattttgatgatttaattatgtctacaatccaatta
tttaaacagatccctgaagttctacagttttaccaacgaaagttccaatatatccacgtt
gatgagtatcaagatacgaacaaagctcaatatatgctcgttaagatgctagcagatcgc
tataaaaatatttgtgtcgtcggagactcagatcaatcgatttaccgttggcgcggtgcg
gatattacaaatatcctttcttttgaaggagactatcctaattctaagacaattatgcta
gaacaaaattaccgttcaacaaaaataattcttcaagccgctaacgatgtcatcaacaat
aacttaaatcgcaaaccaaaaaaattgtggacagatagccaaggtggcgaaaatatctcc
ttttttgttggtgataatgagcatgatgaagcctattttattgttggaaaaataaaagaa
ttaatgaaacaacatgattataaactttcagatatagcgattttatatcgaacaaatgcc
caatcccgtgttattgaggaattattagtaaaatcaaacattaactacagcattgtcggt
gggacaaagttctacgatcgcaaggaaattaaagacatccttgcttatcttagtcttgtc
gctaatccggatgcagatatttcgttacgaagaattataaatgtacccaaacgaggtata
ggtgccactactgttgaaaaaattgctcagtttgcgctgtcccaagagttatctattttt
caggctcttcaagaaattgagcagactggattaggtgacagagtaacaaaaaaattagtt
gattttagcgaccaaatgcttggttgggttcaattacaacaatatgtgtcagttactgaa
cttgttgaagaactattagaaaaaacaggctaccgcgacatgttaaaaaatgataaaaca
attgaagcacggactcgtcttgaaaacattgaagaatttttatctgtaacacaagatttt
gaaagtaaaagtgatgataaatcattagttgcgtttttaacggatttagcacttatttcc
gctattgataaactcgatgaagatgagaacgaagagaaagaatcggaacaagttcttttg
atgacactgcattcagcaaaaggcttagagtttccagtcgtctttttaattggaatggaa
gaaggagtattccctcatagtcgctcgctttttgaagaagaagagatggaagaagaacgt
cgacttgcttatgttggaattactcgagcagagcagcgcctgtacttatcttgtgcaaaa
atgcggacgctatatggtcggacaacgatgaacccacggtcgcgttttattgctgaaatc
ccaagtgatatagtagaatcgcttaatgaacaaaaagaggcaccagcttggtcaaaaact
tctcgcttaatgccaagtgataatattggaggtaaagcagcgccaagacggaaaatgact
tctgctatcagcccgcaaataacgacaactggtggagataagtttacttggcaggttggc
gataaagcagagcacaaaaaatggggagttggaacagtcgttagcgtaaaaggttcaatt
gaaaatgttgaattagacatcgcttttccgcaaccaatcggtattaaacgtctagcggca
aaatttgcaccaataacaaagaaaagctag
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