KEGG   Bradyrhizobium barranii subsp. barranii: J4G43_001190
Entry
J4G43_001190      CDS       T08665                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bban  Bradyrhizobium barranii subsp. barranii
Pathway
bban03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bban00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J4G43_001190 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bban03021]
    J4G43_001190 (rho)
   03019 Messenger RNA biogenesis [BR:bban03019]
    J4G43_001190 (rho)
Transcription machinery [BR:bban03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     J4G43_001190 (rho)
Messenger RNA biogenesis [BR:bban03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     J4G43_001190 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 AAA_22 S1CSD-TOTE-2 AAA DnaB_C Spore_III_AA
Other DBs
NCBI-ProteinID: UEM13000
UniProt: A0A7Z0Q9K8
LinkDB
Position
260827..262092
AA seq 421 aa
MREIKLQDLKSKTPAELVSFAEENGVENASTMRKQELLFAILKQLAIAETDIVGEGVVEV
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVN
TLNFEDPEKAKHKVNFDNLTPLFPNQRFRMEIDDPTRKDLSARVIDIVAPIGKGQRALIV
APPRTGKTVLMQNIAHSIAHNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPA
IDISRSGTRKEELITDPQVLKKMYVLRRILNPMGTMDGIDFLLDKLRSTKSNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaattaaactccaggacctcaagtcgaagacgccggccgagcttgtctcgttc
gcggaagagaatggggtcgagaatgccagcaccatgcgcaagcaggagctgctgttcgcc
atcctcaagcagctcgcgattgctgaaaccgacatcgttggcgagggcgtcgtcgaggtg
ctctccgacggcttcggattcctccgctcgccggacgccaattatctgccgggaccggac
gacatctacgtttcgccctcgcagatccgccgcttcggcctgcgcaccggcgacaccatc
gaaggccacattcgcagcccgaaagagggcgaacgctattttgcgctgctgaaggtcaac
acgctcaatttcgaagacccggaaaaggccaagcacaaggtcaatttcgacaacctcacg
ccgctgtttccgaatcagcgtttccgtatggaaatcgacgacccgacgcgaaaagacctt
tctgcaagggtgatcgatatcgtcgcgccgatcggaaagggccagcgcgcgctgatcgtc
gcgccgccgcgcacgggtaaaaccgtgctgatgcaaaacatcgcgcattcgatcgcgcac
aatcaccccgaatgctatctgattgtgctgctgatcgacgaacgtccggaagaagtcacg
gacatgcagcgctcggtgaagggcgaggtcgtttcgtcgaccttcgacgagccggcggtt
cgtcacgtccaggtcgccgagatggtgatcgaaaaagcaaaacggctggtcgagcatggc
cgcgacgtcgtcatcctgctcgattcgatcacgcgcctgggccgcgcctacaacaccgtg
gtgccgtcatccggcaaggtcttgaccggtggtgtcgacgccaacgcgctccagcgcccg
aagcgcttctttggtgccgcccgcaatatcgaggagggcggctcgctgacgatcattgca
accgcgctggtcgatactggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggtaactccgaactgatcctggaccgcaaggtctcggacaagcgcaccttcccggcg
atcgacatctcgcgctccggcacccgcaaggaggagctcatcaccgatccgcaggtgctc
aagaaaatgtatgtgctccgccgcatcctgaacccgatgggcaccatggatgggatcgac
ttcctgctcgacaagctgcgctcgaccaagagcaattcagagttcttcgactcgatgaac
acctga

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