Bradyrhizobium barranii subsp. barranii: J4G43_001220
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Entry
J4G43_001220 CDS
T08665
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban03030
DNA replication
bban03430
Mismatch repair
bban03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4G43_001220 (holA)
03430 Mismatch repair
J4G43_001220 (holA)
03440 Homologous recombination
J4G43_001220 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bban03032
]
J4G43_001220 (holA)
03400 DNA repair and recombination proteins [BR:
bban03400
]
J4G43_001220 (holA)
Enzymes [BR:
bban01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4G43_001220 (holA)
DNA replication proteins [BR:
bban03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4G43_001220 (holA)
DNA repair and recombination proteins [BR:
bban03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4G43_001220 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
FLAD1_M
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
UEM13006
UniProt:
A0A939LZG3
LinkDB
All DBs
Position
complement(269213..270241)
Genome browser
AA seq
342 aa
AA seq
DB search
MVALRGKEIDAFLARPDGGRPIILLYGPDAGLVRERADALIASAVDDPNDPFSLVKLDGD
ELSAEPSRLVDEAMTVPLFGGRRAIRVRAGSRSFASGIDTLAEMGVKDCRIVIEAGELRP
ESPLRKACERAKTAVAIGCYPDTERDLAKLMDDELRIANLRIAQDARAALMSFLGGDRQA
SRNELRKLTLYAHGKGEITLDDVMSVVADASELKLDPIVDGAFAGRPDIVETEFAKAMIA
GTYPGVIISAAQRQAAWLHKSALAIADGQPASAVLEGGYPRLHFSRKPAVETALRNFSVA
RLAAIIEQLATAALDTRKQSTLAAAIAQRTLMAIAANAKRRG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgctgcgcggaaaagagatcgacgccttcctcgcccgtcccgacgggggccga
ccgatcatcctgctctacggtcccgatgccggcctcgtgcgcgagcgcgccgatgcgctg
attgcctcggctgtcgacgaccccaacgatcccttctcgctcgtcaagctcgacggcgac
gaactctccgccgagccgtcgcggctcgtcgatgaagccatgacggtgccgttgttcggc
ggccgccgcgccatccgtgtccgtgccggctcgcgcagctttgccagcggtatcgatacg
ctggcggagatgggcgtgaaggattgccggatcgtgatcgaggccggcgagctgcgcccg
gaatcgcccctgcgcaaagcctgcgagcgcgccaagacggccgtggcgatcggctgctat
cccgacaccgagcgtgatcttgccaagctgatggacgacgagctccgcatcgccaatctg
cgcatcgcgcaggatgcccgcgcggcgctgatgtcattcctcggcggcgaccgccaggcc
tcgcgcaatgagctgcgcaagctgacgctctatgcgcacggcaaaggcgagatcacgctg
gatgacgtgatgtccgtcgttgccgatgcgtccgagctgaaactcgaccccatcgtcgac
ggcgccttcgccggccggcccgacatcgtcgagacggaatttgcaaaggccatgatcgcc
ggcacctatcccggcgtgatcatctccgccgcgcagcgccaggccgcgtggctgcacaaa
tctgcgctcgcgatcgccgacggccagcctgcctccgcggtgctcgagggcggctatccg
cgcctgcatttttcgcgaaagcccgcggtggaaacggcgctgcgcaatttcagcgtggcg
cggctcgccgcaatcatcgagcagctcgcgaccgccgcgctcgacacccgcaagcaatcc
acgctcgccgccgccatcgcccagcgcacgttgatggctatcgccgcgaatgcgaagcgg
cgggggtaa
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