Bradyrhizobium barranii subsp. barranii: J4G43_001490
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Entry
J4G43_001490 CDS
T08665
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bban03032
]
J4G43_001490
03400 DNA repair and recombination proteins [BR:
bban03400
]
J4G43_001490
Enzymes [BR:
bban01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J4G43_001490
DNA replication proteins [BR:
bban03032
]
Prokaryotic type
DNA Topoisomerases
J4G43_001490
DNA repair and recombination proteins [BR:
bban03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4G43_001490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
UEM13058
UniProt:
A0A850IF77
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Position
325791..326960
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AA seq
389 aa
AA seq
DB search
MMDQQNLGTMRLASADPAAVALAKALGQWPKPAGSARLSPKKVFDTAPATSVEAIAKELG
LRLGDQNELTIRRIKRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYRQVRYSADPSSH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTMLKSNVTLEDDSFVLTFKAKGGKAVRKEC
DAAKLVRAIGILNGVPGKRMFQYRDAYGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatgcggctcgcttcggccgatcctgctgctgtc
gcgctggccaaagccctcggacaatggccgaaaccggccggttccgcccgtctcagcccg
aaaaaggtcttcgacaccgcgcctgcgacctcggttgaggcgatcgcgaaggagctgggc
ctgcggctcggcgaccagaacgagctgaccatccggcgcatcaagcgcggcaagggctat
tccttcgtccgtcccaacggcgcgcatatccgcgacgcccgcaccatccgccggctgcac
gccatggcggtgccgccggcctatcgccaggtgcgctactcggccgatccgagctcgcat
ctccaggcggtgggacgcgatgccgcgggccggctgcaataccgctaccacgccgattgg
gaaaaggtccgcgagcaccgcaaggcgcatcggctggaaaagctcgtcggcgcgctgcca
aagatccggcgcaaggtctccgcgttcctgtcgggcgacgagccgacgcgtgaattcgcg
ctctctgcggtgatcgagctgatcgcgcgcacagcgatccgccccggcaatgaatcctat
gcccgcctcaacggcacccgcggtgccaccacgatgctgaagtcgaacgttacgctcgag
gacgattccttcgtgctgaccttcaaggccaagggcggcaaggcggtgcgcaaggagtgc
gacgctgcgaagctggtgcgcgccatcggcattctgaacggcgttcccggcaagcgcatg
ttccagtatcgcgacgcctacggcatcgtgcgcgcggtcagcaccacgcaggtgaacgcg
tttctgcgcgagatcgccggcatcaagatttcgctgaaggattttcgcacgctgatggcg
tccgcggtcgtggtggaatcgctgtcgcggatcacgccggcgaccagccagcgcggccgc
aagaagcaggtgttggacgccatccgcgccgcagccgacaagctctccaacacgccggcg
atctgccgcaagagctacgtccacgacaccatcgtcaccgccttcgaggacggtatcctc
gaacgcttcgccgcgaccatgaagggccagcgttcgcaggccaggcgcgagcaacttttg
cagcaggtggttgcgaccgcggcagtttaa
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