Bradyrhizobium barranii subsp. barranii: J4G43_002005
Help
Entry
J4G43_002005 CDS
T08665
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban00300
Lysine biosynthesis
bban00470
D-Amino acid metabolism
bban01100
Metabolic pathways
bban01110
Biosynthesis of secondary metabolites
bban01120
Microbial metabolism in diverse environments
bban01230
Biosynthesis of amino acids
Module
bban_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4G43_002005 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4G43_002005 (dapF)
Enzymes [BR:
bban01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J4G43_002005 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Response_reg
Motif
Other DBs
NCBI-ProteinID:
UEM13152
UniProt:
A0A939LZG0
LinkDB
All DBs
Position
427015..427890
Genome browser
AA seq
291 aa
AA seq
DB search
MSALANHAFAKMNGIGNEIVVVDMRDSAAPVTPDDARAVASAPGGVPYDQLMVLRKPRFD
GTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKTGQTTATFETAAGLLNCWQGPAPDLYT
VDMGAPKFGWQDIPLAEEFRDTRYIELQIGPIDNPILHSPSVVSMGNPHAIFWVEDVNAY
DLERFGPLLENHPIFPERANITLAHIVDPQHITIRTWERGAGLTRACGSAACATAVAAAR
LKRTERNVEITLPGGKLGIEWRENDDHVLMTGPATFEYEGSFDPALFAPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtt
gttgtcgacatgcgtgattccgccgcgccggtgacgccggacgacgcccgcgcggtcgcg
tccgcgccgggcggcgtgccctacgatcagctcatggtgctccggaagccgcggttcgac
gggaccgaggccttcatcagcatctacaacaacgacggctccgaggccggcgcctgcggc
aacggcatgcgctgcgtggtgcggcgcatcttcgagaagaccgggcagaccacggcaacg
ttcgagaccgctgcgggcttgctcaattgctggcagggcccggcacccgatctctatacc
gtcgatatgggcgcgccaaaattcggctggcaggacattccgctggcggaagagtttcgc
gacacccgctacatcgaattgcagatcgggccgatcgacaatccgatcctgcattcgccc
tcggtggtgagcatgggcaatccgcatgcgatcttctgggtcgaggacgtcaacgcctac
gatctcgagcgttttggtccgctgctggaaaatcatccgatcttccccgaacgtgccaac
atcacgctcgcccatatcgtcgatccccagcacatcacgatccgcacctgggagcgtggc
gcgggcctgaccagagcttgtggttcggcggcctgcgcgaccgcggtcgctgctgcacgg
ctgaagcgcaccgagcgcaatgtcgagatcacgctgcccggcggcaagctcgggatcgaa
tggcgtgaaaacgacgaccacgtgctgatgacgggccccgcgaccttcgaatatgagggc
tccttcgatccggcgctgttcgcgccggtcggctga
DBGET
integrated database retrieval system