Bradyrhizobium barranii subsp. barranii: J4G43_004315
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Entry
J4G43_004315 CDS
T08665
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban00300
Lysine biosynthesis
bban01100
Metabolic pathways
bban01120
Microbial metabolism in diverse environments
bban01230
Biosynthesis of amino acids
Module
bban_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4G43_004315 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bban01002
]
J4G43_004315 (dapE)
Enzymes [BR:
bban01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
J4G43_004315 (dapE)
Peptidases and inhibitors [BR:
bban01002
]
Metallo peptidases
Family M20
J4G43_004315 (dapE)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UEM13556
UniProt:
A0A939RZ11
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Position
complement(883503..884669)
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AA seq
388 aa
AA seq
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MTDALSIARDLIRCPSVTPADAGALGVLEKALNAAGFTCHRVTFSEPDTADVDNLYARIG
TEGPHITFAGHTDVVPPGDENAWSVGAFSGEVKDGFLHGRGAVDMKGGIACSVAAVLEHL
AANGGTPRADGKGSISFLITGDEEDVSINGTIKLLKWAAERGEKFDHCVLGEPSNVETLG
DTIKVGRRGSQSGTLYVDGVQGHVAYPHRASNPVPDISRLIVAISDEPLDHGSAQFQASN
LEFTSVDVGNKANNVIPGEARAKFNIRYNDNHTQASLRELVETRLTKACGNRIKARIVWE
PSNSNVFVTKPGPFTDLAVSAIEEVTGRKPELSTSGGTSDARFISSYCPVIEFGLVGQTM
HQVDERVPVVDLERLTQVYRGILTRYFG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgctctctcgattgcccgcgatctcatccgctgcccctcggtaactccggcc
gatgccggtgcgttgggcgtgcttgagaaagccctcaacgctgccggcttcacttgccac
cgcgtgaccttctccgaacccgacaccgccgacgtcgacaatctctatgcgcggatcggc
actgaaggcccgcacatcaccttcgccggccacaccgacgtggtgccacccggcgacgag
aacgcctggagcgtcggcgcgttctcgggcgaggtgaaggacggctttctgcacggccgc
ggcgcggtcgacatgaagggcgggatcgcctgctcggtggcagccgtgctcgagcatctc
gccgccaatggcggcacgccgcgcgccgatggaaagggctcgatctcattcctgatcacg
ggcgacgaggaagacgtctccatcaacggcaccatcaagttgctgaaatgggccgcggag
cgcggcgaaaagttcgaccattgcgtgctcggcgagccctccaacgtcgagacgctcggc
gacaccatcaaggtcggccgccgcggctcgcaatccggcacgctctacgtcgacggcgtg
cagggccatgtcgcctatccgcaccgtgcatccaatccggtgcctgatatctcgcggctg
atcgtggcgatcagtgacgagccgctcgaccatggcagcgcgcaattccaggcctccaat
ctcgaattcacctcggtggacgtcggcaacaaggccaacaacgtcatccccggcgaggcc
cgcgcaaaattcaacatccgctacaatgacaaccacacccaggcatccttgcgcgagctg
gtcgagacgcgcctgacgaaagcctgcggcaaccgcatcaaggctcgcatcgtctgggag
ccctcgaactcgaatgtgttcgtgaccaagcccggcccgttcaccgatcttgcggtgtcg
gcgatcgaagaggtgacgggccgcaagccggagctgtcgacctcaggcggcacctcggat
gcgcgcttcatctcgagctattgcccagtgatcgagttcggcttggtcggccagaccatg
caccaggtcgacgagcgcgtgccggtggtggatttggagagattgacgcaggtgtatcgg
gggatactgacgcggtattttgggtag
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