Bradyrhizobium barranii subsp. barranii: J4G43_015230
Help
Entry
J4G43_015230 CDS
T08665
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J4G43_015230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bban03400
]
J4G43_015230
Enzymes [BR:
bban01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J4G43_015230
DNA repair and recombination proteins [BR:
bban03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J4G43_015230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
HHH_2
Helicase_RecD
NTPase_1
nSTAND3
PIF1
DEAD
CbiA
AAA_28
AAA_22
TsaE
TrwB_AAD_bind
AAA_16
AAA
MeaB
AAA_29
NPHP3_N
Mg_chelatase
AAA_24
NACHT
RsgA_GTPase
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
UEM15437
UniProt:
A0A939S0S4
LinkDB
All DBs
Position
3145804..3148005
Genome browser
AA seq
733 aa
AA seq
DB search
MKPQPEPSSREVLAGLVERVTYHNDGNGYCVLRIKARGHRELVTVVGHAAVISAGEWITA
SGEWVNDRTHGQQYRAKFLKTSEPTSLDGIEKYLGSGMIRGIGPVYAKKLVRAFGEKVFD
TIEAEPERLREVTGIGPVRANRITAAWAEQKIVREIMVFLHSNGVGTARAVRIYKTYGAD
AVQVMTENPYRLARDIRGIGFKTADAIAMKLGIEKTAMIRVRAGISYGLTEAMDEGHCGL
PTDELVPLAEKLLEVPVELVRIALDLERTAGTVIADSVGETSCVFLAGLHRAERSIAERL
IRLANGTLPWPWINPDKALPWVEQRIGLTLAESQVAAIRLALMSKALVMTGGPGVGKTTI
VKGILRILAAKGVRLLLCAPTGRAAKRMTEATGFEARTIHRLLEVDPKGGGFKRGEDNPL
DCDLLVVDEASMVDVMLMQSLIKAVPDKSALLIVGDIDQLPSVGPGQVLADVISSGAVPV
VRLTEVFRQAAQSRIIISAHRINQGAIPDLSLPGTDSDFYFVQASDPETAVQRIIELVKT
RIPNRFGLDPIRDIQVLCPMNRGGVGARSLNIELQAALNPAGERKVERFGWTFASGDKVM
QIENDYDKEVYNGDIGYIDDVSSEDSELTASFDGRSVIYEFGELDTLVPAYAATIHKSQG
SEYPAVVIPVMTQHYTMLQRNLLYTGVTRGKQLVVLVGQKKAVAIAVRNVSGRRRWSKLN
EWLASRIASMPTR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcagccggaaccatcaagtcgggaagttcttgctggccttgttgagcgcgtc
acataccacaacgacgggaatggctactgcgttttgcggatcaaggcgcgcggccaccgc
gaactggtcactgtagtcgggcacgcagcggtgatctccgctggcgagtggattaccgca
tcgggcgaatgggtcaatgaccgcacccatggccaacagtacagagcgaagttcttaaag
acctcggaaccgacatcactcgatggcatcgagaaatacctcggctccgggatgatccgc
ggcatcgggccagtctatgccaagaagctggtgcgcgccttcggtgagaaggtgttcgat
accatcgaggcggagcccgaacgcctgcgcgaggtaacgggcatcggcccggttcgggcc
aaccggatcacggccgcctgggccgaacagaagatcgttcgcgaaatcatggtcttcctg
cacagcaatggcgtcggcacagcgcgggcggtgcgcatctataagacctatggcgcggac
gccgtacaggtcatgaccgagaacccctaccgcctcgcgcgtgacattcgcggcatcggc
ttcaagactgccgacgcaatcgcgatgaaactcggcatcgaaaagaccgcaatgatccgg
gttcgggccgggatctcctatgggctgaccgaggcgatggacgaagggcactgcggtttg
ccgacggatgaactggtgccgcttgccgagaagctgcttgaggtcccggtggaactggtg
cgcattgcgcttgatctcgaacggacagcaggcacagtcatcgcggacagcgtaggcgaa
acgtcatgcgtatttctggcgggcctgcatcgggcggagcgttcgattgccgagcgactg
atccggcttgcgaatggcacactgccctggccatggatcaatccagacaaggcactgcct
tgggtcgagcaacggatcgggcttacccttgccgaaagccaggtcgctgcgatccggctc
gcattgatgtccaaagcgttggtcatgaccggcggtcctggtgtcggcaagaccaccatc
gtcaaaggtattctccgcattctcgcagcaaagggcgtgaggctcctgctatgcgcgccg
accggccgcgccgccaagcgcatgaccgaggcgaccggttttgaggctaggacgatccac
cggctgctggaggttgaccccaagggcggcggcttcaagcgcggcgaagacaatccgctc
gactgcgacctgcttgttgtcgacgaagcctcaatggtagacgtcatgctgatgcagtca
ctcatcaaggccgtgccagacaagtctgcccttttgatcgtcggcgacatcgaccagctt
ccttcggttgggccaggccaagtgctggccgacgtcatctcatccggtgctgtgccggtg
gtgcgtctcaccgaggtgttccggcaggccgcgcaaagccgcatcatcatcagcgcacat
cgcatcaatcagggggccatccccgatctcagcctgcccggcacggatagcgatttctac
ttcgtgcaagcgagcgatccagaaaccgccgtacagcgtatcatcgagttggtgaagaca
cggatccccaatcgcttcggcctcgacccaattcgggacattcaggttctgtgtccaatg
aaccggggcggcgtcggtgcgcgctcgctaaacattgaactgcaggcggctctgaacccc
gccggcgagcgcaaggtcgaacgcttcggttggacgttcgcgtccggcgacaaagtgatg
cagatcgaaaacgattacgacaaggaggtctataacggtgacatcggttatatcgacgat
gtcagttccgaagacagcgaactcaccgcaagcttcgacggccgctcggtcatttatgag
tttggcgagctcgacacgctggtgccggcttacgcagcaactatccataagagccagggt
tcggaataccctgccgtagtgatcccggtgatgacgcagcactacaccatgctgcaacga
aacctgctctataccggcgtcacccggggcaaacaactggtcgttctggtcggtcagaag
aaagccgttgccatcgcggttcgcaacgtttcggggcggcgaaggtggtcgaaattgaac
gagtggctggcgtcaagaatagcatcgatgccgacaagatga
DBGET
integrated database retrieval system
