Bradyrhizobium barranii subsp. barranii: J4G43_016055
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Entry
J4G43_016055 CDS
T08665
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bban
Bradyrhizobium barranii subsp. barranii
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bban01002
]
J4G43_016055
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bban01011
]
J4G43_016055
Peptidases and inhibitors [BR:
bban01002
]
Cysteine peptidases
Family C82
J4G43_016055
Peptidoglycan biosynthesis and degradation proteins [BR:
bban01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
J4G43_016055
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UEM15581
UniProt:
A0A939M519
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Position
complement(3330914..3332263)
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AA seq
449 aa
AA seq
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MSKRHAMIVAVGVLASASALAQTETTGQAGPRPATTAGTVPAAANPAHAAAPKAAAPAST
AESRSAAALALTHEPTYDEGSAQRIKDAALSYSDLAVRGGWPTIPADAKFALGVQGASDE
QLRKRLILSGDLAADKATGAFDQDLADAVKRFQARHGLAPTGTVTPRTVAAMNVSVQKRI
RQLEASLQRLENMNFGFGQRYVVVNIPAAFAEAVENDVVVRRYRVIVGKTEKPSPTLTAQ
ITSVVLNPTWTVPSSIAKTEISAHMRKDPTYLSRMHMEVLDAHDNPIDPHSVDWSGTHTP
IFTVRQHNGTFNALGAVKIDMPNSYSVYMHDTNQRNLFSDDYRFDSHGCSRVDNVRDLAA
WLLKDQPKWSRAAIDTEIASGQHLEVAMAKKVPVAWIYLTAWMTRDQTVQFRNDVYSQDE
QLLEATAEEAAFFSNAGSHPLTAHMHATQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgccatgcgatgatcgttgccgtcggcgtgctcgcgagcgcttccgcgctg
gcgcaaaccgaaaccacgggacaggcaggcccgaggcctgccacgacggccggtacggta
ccggcggcggcgaacccggcccatgctgccgcgccgaaggctgccgcgcccgcttcgacg
gcggagagccgctccgctgcggcactcgcgctgacgcatgagccaacctatgacgagggc
tcggcccagcgcatcaaggatgccgcgctcagctactccgatcttgccgtacgcggcggc
tggccgaccatccctgccgatgccaagttcgccctcggcgtccaaggcgccagcgacgag
cagctgcgcaagcgactaatcctctccggcgatctcgccgccgacaaggcgaccggcgcc
ttcgaccaagatctcgccgacgccgtaaaacgcttccaggcccgccatggactggcgccg
accggcacggtgacgccgcgcacggtcgcggcgatgaacgtctccgtgcagaagcgcatc
cggcagctggaggcttcgctccagcggctcgagaacatgaatttcggcttcggccagcgc
tatgtcgtggtcaacatccccgccgcgtttgccgaagcggtcgagaacgatgtggtggtg
cggcgctatcgcgtcatcgtcggcaagaccgaaaagccctcgccgaccctgacggcccag
atcaccagcgtcgtgctcaatccgacctggacggtgccgtcctcgatcgccaagaccgag
atctcggcgcatatgcgcaaggatccgacctatttgtcgcgcatgcacatggaggtgctc
gacgcccacgacaatccgatcgacccgcattcggtcgactggtcgggcacgcacacgccg
atcttcaccgtgcgccagcacaacggcaccttcaacgcgctcggcgcggtgaagatcgac
atgccgaattcctattcggtctatatgcacgacaccaaccagcgcaacctgttcagcgac
gactaccgcttcgattcccatggctgctcgcgcgtcgacaatgtgcgcgatctcgccgcc
tggctgctgaaggaccagccgaaatggagtcgcgccgcgatcgatacggagattgcgagc
ggccagcacctcgaggtcgccatggcgaagaaggtgccggtggcctggatttacctcacg
gcatggatgaccagggaccagaccgtccagttccgcaacgacgtctatagtcaggacgag
cagttgctggaggccaccgccgaagaggcggcgttcttcagcaatgccggcagccatccc
ctgaccgcacacatgcacgcaacgcagtag
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