Bradyrhizobium barranii subsp. barranii: J4G43_017870
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Entry
J4G43_017870 CDS
T08665
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban00300
Lysine biosynthesis
bban00470
D-Amino acid metabolism
bban01100
Metabolic pathways
bban01110
Biosynthesis of secondary metabolites
bban01120
Microbial metabolism in diverse environments
bban01230
Biosynthesis of amino acids
Module
bban_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4G43_017870
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4G43_017870
Enzymes [BR:
bban01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J4G43_017870
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UEM15910
UniProt:
A0A939M854
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Position
complement(3748358..3749581)
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AA seq
407 aa
AA seq
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MALRPTIAAFGQIEGQLAVGGVPLTRLAERVGSTPFFAYDRALLTDRVKLLRSTLPRRIK
LSYAIKANPMPAVAQHLATLVDAFDVASASEMRTALDTPMRPANVSFAGPGKNEASIAQA
VASGVIIEIESATEVARVIKAGERLGVRPRIAVRVNPDFEVKGSGMRMGGGPQQFGIDAE
KVPSLLADIAAADVEFLGFHVFAGSQNLSADLICSAQRRTVDLILELARKSPPIRYVNLG
GGLGIPYFDKDHPLELSAIAGNLAELLETAIEPQLPEARVVIELGRYIVGECGVYVTRVV
DRKESRGRQYLVVDGGLHHQLAASGNFGQVIRRNYPIAVGNRLGNEAEEVVNVVGCLCTP
LDLLGDNVSLPRAEIGDLIVLFQAGAYGLTASPTAFLGHPPPVEVLV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttggccctgcgaccaaccatagccgcgtttggccagatcgagggtcaactcgccgtcggt
ggcgtcccactcactcggctggccgagcgggtcggctccacgccgttcttcgcgtatgat
cgcgcgttgctcaccgatcgggtcaaactgctcaggtcaacgctcccgcggcgcatcaag
ttgagctacgcaatcaaggccaatccaatgcctgcggtggcgcagcatctcgcgacgctg
gtggacgccttcgacgtcgcgtcggcatccgagatgcgaacggcgctcgacacgccgatg
cgcccggccaatgtcagttttgccggccccggcaagaacgaggcaagcatagcgcaggcc
gttgcctcgggtgtcatcatcgaaatcgaatcggccaccgaggttgcgcgagtcatcaag
gccggcgagcggctaggggtgcgcccgcggatcgcagtccgcgtgaacccggacttcgag
gtgaagggttcaggtatgcgcatgggcgggggtccgcagcagttcggcatcgatgccgaa
aaggtgccatctctgctcgccgacatcgcggccgcggacgtcgagtttctgggattccat
gtcttcgccgggtcccagaacttgagcgcagatctcatttgctcggcgcaacgccgcaca
gttgatctcattctggagttggcccggaagtcgccgccgatccgctacgttaacctcggc
ggcggactcggcattccctattttgacaaggatcacccgttggagctgtcggccatcgcc
ggcaacctcgcggagctactcgagactgccatcgagccacagttgcccgaggcacgagtg
gtcatcgagctcggccgctacattgtcggcgagtgcggcgtctacgtcacccgcgtcgtc
gatcgcaaggagtcgcggggacgccaatacctggtggtcgacggcggactgcaccatcaa
ctcgccgcgtccggcaattttggacaggtgatccggcgaaattatccgatcgcggtcggt
aaccggcttggcaatgaagccgaggaagttgtgaacgtcgtcggctgtctgtgcaccccg
ctggatttgctcggggacaacgtcagcttgccgcgagccgaaattggcgatttgatcgtt
ctgtttcaggccggcgcctacgggttaacagccagccccactgctttccttggacacccg
ccgccggttgaagtgcttgtatag
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