Bradyrhizobium barranii subsp. barranii: J4G43_018380
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Entry
J4G43_018380 CDS
T08665
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban00330
Arginine and proline metabolism
bban00480
Glutathione metabolism
bban01100
Metabolic pathways
bban01110
Biosynthesis of secondary metabolites
bban04148
Efferocytosis
Module
bban_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
J4G43_018380
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J4G43_018380
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
J4G43_018380
Enzymes [BR:
bban01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
J4G43_018380
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UEM16003
UniProt:
A0A939S460
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All DBs
Position
complement(3863432..3865789)
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AA seq
785 aa
AA seq
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MDYFKRFNFLFAAPVFDADDLEGIRFNQIIEEIQRSGFEVVRARRLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTSALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPTFIAKNLISRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYNRSPIGRVFV
EHLGESVFRDDLDNSVLDLGDLLTHEGPALRAQKEAAQIFGAEKTYFVLNGTSTSNKVAL
GALVTDGDLVLFDRNNHKAAHHGALMINGGIPIYVPTIRNAWGLIGPMRWDMLDEKALRE
AIRNHPLVTDKDAWRKERPFRVAVVEQCTYDGSIHSAEMILKRIGHLCEYILFDEAWAGF
MKFHPLYAGRFAMGLANLPPEAPGIIATQSTHKQLASFSQASQIHIKDRHIRGQKRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREF
EEKEQNPDRRWFFEPFVPDRVAIPDVSRPGAAHNVAWETLSTDELATNPALWQLSPDTNW
HGFPDLAEGFAMTDPNKLTLLTPGFDRTTGAYAEHGIPAPVVAQYLRENRIVPEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKRLHDDNALLADVIPEFYQRRQARYAGVRLRDLCGD
MHRFFRAADVSALQARQFMPEHMPEIAMSPRDAARYLFKNDVDYLPIEAIAGRIATTPFV
VYPPGIATIVPGERLTERAKPMVDYLKMFETCFNTFPGFDVEIQGVYKEIDAQGRIGLYT
YVVAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggattatttcaagcgcttcaacttcctgttcgccgcgcccgtgttcgacgccgacgat
ctggaaggcatccgcttcaaccagattatcgaggagatccagcgctccggcttcgaggtc
gtgagggcccgcaggttggaggacgccgagatcgcggtgcagaccgacgccgcgatcggc
tgcatggtggtggactggggcaagaagggcctcgaggggaagacctcggcgctgatcaac
ctgatgcgtcgccgcggcctcgacttcccgatcatcctcctgatccggcgcaagcgcttc
gaggatttgccggtcgaggtgctcgacttcatcgacggctatgtcttcctctccgaggag
acgccgaccttcatcgccaagaatttgatcagccggctcaagcaatatgccgagacgctg
aagacgccgttcttcggcgcgctggtcgactacgccgaagaaggcaaccagctctggacc
tgtccgggtcacaatggcggcgtgttctacaaccgcagtccgatcggccgggtcttcgtc
gagcatctcggcgaatccgtgtttcgcgacgacctcgacaattccgtgctcgacctcggc
gacctcctcacccatgagggtcccgcgctgagggcgcagaaggaagccgcccagattttc
ggcgcggagaagacctatttcgtgctcaacggcacctcgacctcgaacaaggtcgcgctc
ggcgctctcgtcaccgacggcgaccttgtgctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgatgatcaatggcggcatcccgatctacgtgccgaccatccgcaat
gcctggggcctgatcggcccgatgcgctgggacatgctcgacgagaaggccctgcgcgag
gcgatccggaaccatccgctggtgacggacaaggacgcctggcgcaaggagcggccgttc
cgcgtcgccgtggtcgagcagtgcacctatgacggctcgatccacagcgccgagatgatc
ctgaagcgcatcggccatctctgcgaatatatcctgttcgacgaggcctgggccggcttc
atgaagttccacccgctctatgccggccgcttcgccatggggctggcgaaccttcctccc
gaagcgcccggcatcatcgccacgcaatccacccacaagcagctcgcgagcttctcgcag
gcctcccagatccacatcaaggaccgccatatccgcggccagaagcggcgcgtcgaacac
cgccgcttcaacgagagcttcatgcagcacgcctcgacctcgccgttctacccgctgttc
gcctccctcgacgtcggcgcgcagatgatgaagggccgctcgggcgaggtcctctgggac
gacacgatccggctcggcatcgagctgcgcaagaagatccgcgcgatgcgccgggagttc
gaggagaaggagcaaaatccggatcgccgctggttcttcgagcccttcgttcccgatcgc
gtcgccattcccgacgtcagccgccccggcgccgcgcacaacgtcgcctgggagaccctc
tccaccgacgagctcgccaccaatccggcgctgtggcagctctcgccagataccaactgg
cacggctttcccgatctcgcggagggctttgccatgaccgacccgaacaagctgacgctg
ctgacgcccggcttcgatcgcaccaccggcgcctatgccgagcacggcattcccgcgcct
gtggtcgcgcagtatttgcgcgaaaaccgcatcgtccctgagaagaacgacctcaactcc
ctgctcttcctgctgacccccggcgtcgaggcgagcaaggccggcacgctgatctccggg
cttgtcgcattcaaaaggttgcatgacgacaacgcgttgctggccgacgtcatccctgaa
ttctaccagcggcggcaggcgcgctatgccggcgtgcggctgcgcgatctctgcggcgac
atgcaccgcttcttccgcgccgccgacgtcagcgccctccaggcccggcagttcatgccc
gagcacatgcccgagatcgcgatgtcgccccgcgatgccgcgcgctatctgttcaagaac
gacgtcgactatttgccgatcgaggcgatcgcgggccgcatcgccaccacgccgttcgtg
gtctacccgcccggcatcgccaccatcgtgcccggcgaacggctgacggagcgggccaag
cccatggtggattatctcaaaatgttcgaaacctgtttcaacacgttcccggggttcgat
gtggaaatccagggcgtctacaaggagatcgatgcacagggccgcatcggcctctatact
tacgtcgttgccgagtag
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