Bradyrhizobium barranii subsp. barranii: J4G43_029325
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Entry
J4G43_029325 CDS
T08665
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban03030
DNA replication
bban03430
Mismatch repair
bban03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4G43_029325 (dnaE)
03430 Mismatch repair
J4G43_029325 (dnaE)
03440 Homologous recombination
J4G43_029325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bban03032
]
J4G43_029325 (dnaE)
03400 DNA repair and recombination proteins [BR:
bban03400
]
J4G43_029325 (dnaE)
Enzymes [BR:
bban01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4G43_029325 (dnaE)
DNA replication proteins [BR:
bban03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4G43_029325 (dnaE)
DNA repair and recombination proteins [BR:
bban03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4G43_029325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
DUF6374
Motif
Other DBs
NCBI-ProteinID:
UEM08850
UniProt:
A0A939S696
LinkDB
All DBs
Position
complement(6056133..6059636)
Genome browser
AA seq
1167 aa
AA seq
DB search
MPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPALALTDTDNMFGALEFSDKMAGS
GIQPIVGCELAIDFGDQDPNARNALLPSRVVLLAAQERGYRSLMRLNSRAFLESPDSHAP
FIKFDWLDGETEGLIALTGGPDGPISLALASGQAEIAATRCERLAGLFGDRLYVELQRHN
IDKERRVESGLIDIAYAKGLPLVATNEPYFASNDDYEAHDALLCIAGGRLIAETDRLQLT
PDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPMTRKPILPFFTVGAAASSDAASVE
AAELKRQAEEGLANRLRVHGLSQGTTEEDYDKRLAFELDVIMRMKYAGYFLIVSDFIKWA
KGQGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQDRR
GEVIRYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAAPV
TLAAAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPMY
RDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKPRNIDIDLATLPIDDA
ESYQMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCSRKH
GDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAEMD
KQRDIFVAGAVKNGVPKGQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYPVE
FIAASMTLDLNNTDKLSEFRSEAQRLGIKVEPPNINRSGPTFEVGEKTIYYALAALKGVG
IQAIEQIIEERTRRGLFTSLADFAARVNPRAINKRIIESLAAAGAFDTLEPNRARVFAGA
DSILAACQRAHQAETIGQNDMFGMSADAPTIMLPQIEPWLPAERLRREYDAIGFFLSGHP
LDDYAMVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPTG
HFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDDAAAKTQKGLRI
FVRDTKPLESIAKRLAGPDMAASNGAAPKVGSPGIAPRSNGDGEVSLVMMLDLETEVEMK
LPGRFKVSPQIAGAIKAVAGVVDVQQL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccggatttgtccaccttcacgttcactcggcctattcgctgctcaagggc
tcgatcaagatcgccaagctcgccgagcttgcgaagaaagaccaccagcccgcactggcg
ctgaccgacaccgacaacatgttcggcgcgctggagttctccgacaagatggcgggctcc
ggcatccagccgatcgtcggctgcgagctcgcgatcgatttcggcgaccaggatcccaac
gcgcgcaatgcgctgctgccgtcgcgtgtggtgctgctggcggcccaggagcgcggctat
cgcagcctgatgcggctgaactcgcgcgcgttcctcgaatcgcctgacagccacgcgccg
ttcatcaagttcgattggctcgacggtgagaccgaaggcttgatcgcactcacgggcggc
cctgacgggccgatctcgctcgcgcttgccagcgggcaggccgaaattgcggcgacgcgc
tgcgagcgtctcgccggcctgttcggcgaccgcctctatgttgaattgcagcgccacaac
atcgacaaggagcgccgcgtcgaaagcgggctgatcgacattgcctacgcaaaaggcctg
ccgctggttgcgaccaacgagccgtatttcgcttcgaacgacgattacgaggcgcacgat
gcgctgctctgcatcgccggcgggcggctgatcgccgagaccgatcgccttcagctcacg
cccgatcaccgcttcaagacccgcgccgagatggcggtgctgttcgccgacattccggag
gcgctggcctcgacggtggagatcgccgagcgctgctcgttccgcccgatgacgcgcaag
ccgatcctgccgttcttcacggtcggcgccgccgcaagctccgacgccgcgtcggtcgag
gcggccgagctgaagcgccaggcggaggaggggctcgccaaccgcctgcgcgtgcacggc
ctttcgcagggcactacggaagaggactacgacaagcgcctggcgttcgagctcgacgtc
atcatgcggatgaaatacgcgggctacttcctgatcgtctcggacttcatcaaatgggcg
aagggccaggggattccggtcggaccggggcgcggttcgggcgccggctctctggtcgcc
tgggcgctgaccatcaccgacctcgacccgatcaagttcggcctgctgttcgagcgcttc
ctcaatccggaacgcgtctcgatgccggacttcgacatcgatttctgccaggaccgccgc
ggcgaggtgatcaggtacgtccaggagcgctacggtcgcgaccaggtcgcgcaaatcatc
accttcggtacgctgcaggcgcgcggcgtgctgcgcgacgtcggccgggtgctgcaaatg
ccctatggccaggtcgacaagctgaccaagctggtgccgcagaatccggccgcgccggtg
acgttggccgccgcgatcgagagcgagccgaagcttcaggcgttccgcgatgaagacccg
gtggtggcgcgcgccttcgacatcgcgcagcgcctcgaaggcctgacccgccacgcctcg
acgcacgcggccggcatcgtgatcggcgatcgccccttgagcgaactcgtgccgatgtac
cgcgatcccaagtcggacatgccggtgacccagttcaacatgaaatgggtcgagccggcc
gggctggtaaagttcgacttcctcggcctgaagacgctgaccgtgctcgacgtcgcggtg
aagctcttgaagccgcgcaacatcgacatcgatctcgcgacgctgccgatcgacgatgcc
gaaagctaccagatgctggcgcggggcgaggtggtcggcgtgttccaggttgaaagccag
ggcatgcggcgcgcgctggtcgacatgcgccccgaccgtttcgaggacatcatcgcgctg
gtcgcgctctatcgcccgggcccgatggcgaacatcccgacctattgctcgcgcaagcac
ggcgacgaggagccggaatatctgcatccggtgctggagccgatcctgaaggagaccttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtcatgtcgggctattcg
ctcggcgacgccgacctgctgcgccgcgccatgggcaagaagatccgcgccgagatggac
aagcagcgcgacatcttcgtcgccggcgcggtcaagaacggcgtgccgaaggggcaggcc
gagaccatcttcgagctgctcgcaaagttcgccgactacggcttcaacaagagccacgcg
gcggcctacgcgctggtgtcctaccacaccgcctatatgaaggcgcattacccggtggag
ttcatcgcggcgtcgatgacgctcgatctcaacaacaccgacaagctctccgaattccgt
tccgaggcgcagcgcctcggcatcaaggtcgagccgccgaacatcaatcgctcaggcccg
accttcgaggtcggcgagaagacgatctactacgcgctcgccgcgctcaagggcgtcggc
atccaggcgatcgagcagatcatcgaggagcggaccaggcgcgggctgttcacctcgctc
gccgacttcgccgcgcgggtcaatccgcgcgcgatcaacaagcgcatcatcgaaagcctc
gccgctgccggcgccttcgacacgctggagccgaacagggcgcgggtttttgccggcgcg
gactcgatcctggccgcctgccagcgtgcgcatcaggccgagaccatcggccagaacgac
atgttcggcatgtcggcggatgcgccgaccatcatgctgccgcagatcgagccctggctg
ccggccgagcggctgcgccgcgaatatgacgcgatcggattcttcctgtcgggccatccg
ctcgacgattacgcgatggtcctgaagcgcctgcgggtgcagagctgggccgagttctcg
cgtgcggtgaagaccggcgccaccgccggcaaggtcgcggccaccgtggtgtcgcgcatg
gagcggcgcaccaagaccggcaacaagatgggcatcatggggctgtctgatcccacgggc
catttcgaggcggtgctgttctccgagggcctcgcgcaataccgcgatgtgctcgagccg
ggcgccgccgtgctgctccagttgggcgcggaattgcagggcgaggacgttcgtgcccgc
gtgctgcatgccgagccgctcgatgacgccgccgccaagacgcagaagggcctgcgcatc
ttcgtgcgcgacaccaagccgctggagtcgatcgccaagcgattggccggacccgacatg
gcggcctcgaacggcgccgcgccaaaagtcggcagtcccggcatcgcgccgcgctcgaac
ggcgacggcgaggtctcgctggtgatgatgctcgacctcgagaccgaggtcgagatgaag
ctgcccggccgcttcaaggtctcgccgcagatcgccggcgcgatcaaggcggtcgcgggc
gtggtggacgtgcagcagctctaa
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