Bradyrhizobium barranii subsp. barranii: J4G43_032270
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Entry
J4G43_032270 CDS
T08665
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4G43_032270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bban03021
]
J4G43_032270
03400 DNA repair and recombination proteins [BR:
bban03400
]
J4G43_032270
Enzymes [BR:
bban01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4G43_032270
Transcription machinery [BR:
bban03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4G43_032270
DNA repair and recombination proteins [BR:
bban03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4G43_032270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
UEM09392
UniProt:
A0A939S3N8
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All DBs
Position
complement(6601754..6602785)
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AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQIQPGSDSNRFATIVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTA
GDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSL
YSPVRKVSYKVENTREGQILDYDKLTMTIETNGALTPDDSVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaaaaattggcaagaactgattcggccgaacaagctc
cagatccagcccggtagcgattcgaaccgtttcgcgaccatcgtcgccgagccgctcgag
cgcggcttcggccagacactcggcaacgcgctgcgccgtatcctgctctcctcgctccag
ggcgcggcggtgcagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgcg
ggtgtccgtgaagacgtcaccgacatcgtgctcaacatcaaggacatctcgatcaagatg
cagggcgaaggccccaagcgcatggtcgtgaagaagcagggcccgggcgtcgtcaccgcc
ggcgacatccagaccgtgggcgatgtggtcgtgctcaacccggacctccagatctgcacg
ctcgacgagggcgccgagatccgcatggagttcacggtcgccaccggcaagggctacgtg
cccgccgagcgcaaccgtcccgaggacgcgccgatcggactgatcccggtcgacagcctg
tactcgccggtccgcaaggtctcctacaaggtcgagaacacccgtgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgctgacgccggatgactcg
gtggcttatgccgcccgcatcctgcaggatcagctcaacgtgttcgtcaacttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgagctgtcggtgcgttcggccaactgcttgaagaacgacaac
atcgtctacatcggcgacctcgtgcagaagagcgaagcggaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatggggctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgag
gatcactactga
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