Bradyrhizobium barranii subsp. barranii: J4G43_044640
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Entry
J4G43_044640 CDS
T08665
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban02020
Two-component system
bban02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4G43_044640 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4G43_044640 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bban03021
]
J4G43_044640 (rpoN)
Transcription machinery [BR:
bban03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4G43_044640 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UEM17759
UniProt:
A0A939MF27
LinkDB
All DBs
Position
complement(9157795..9159249)
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AA seq
484 aa
AA seq
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MALTQRLEFRQSQSLVMSPQLMQAIKLLQLSNLDLMTFVEEELECNPLLERASDDAAGAE
APTEVDQVSGDQLAEAQVRDARDGAMTTYTEWGGGGSGDEDYNLEAFVASETTLSDHLAE
QLSVAFTAPAQRMIGQYLIDIVDEAGYLPPDLGQAAERLGATQEDVEHVLAVLQEFDPPG
VCARNLRECLAIQLRELDRYDPAMQALVEHLDLLAKRDIASLRKLCGVDDEDIADMIDEL
RRLSPKPGMKFGSARLQTMVPDVYVRPAPDGGWHVELNSDTLPRVLVNQTYYSKLSKKIG
KDVDKSYFNDALQNATWLVRALDQRARTILKVATEIVRQQDGFFTLGVAHLRPLNLKAVA
EAIQMHESTVSRVTANKYMATNRGTFELKYFFTASIPSADGGEAHSAEAVRHRIKQLIES
EEPSAVLSDDAIVERLRVSGIDIARRTVAKYREAMRIRSSVQRRRDNMWSTMNSRASGGT
GLDK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacgcaaagattagagttccggcaatcccagtcgctggtcatgtcgccgcag
ctgatgcaggcgataaagctgctgcaattatctaatctcgacctcatgaccttcgtggag
gaagagctggagtgtaatccgctgctcgagcgtgccagtgacgatgcagctggggccgaa
gccccgactgaggtcgatcaggtcagcggcgatcagctggccgaggcccaagtgcgcgac
gcccgggatggcgccatgaccacctataccgaatggggtggcggcggctcgggtgacgaa
gactacaatctcgaagcgtttgtcgcgtccgagacaacattgtccgaccacctggccgaa
caactgtcggtcgcattcaccgcgccggcgcagcgcatgatcgggcagtatctgatcgat
atcgtcgacgaagccggctatctgccgccggatctcggccaggccgccgagcggctcggc
gcaacgcaggaggatgtcgagcacgttcttgccgtcctgcaggagttcgatccgcccggc
gtctgtgcgcgtaacttgcgcgagtgcctggcgatccagctccgcgagctcgatagatac
gatccggcgatgcaggccctcgtcgagcatctcgatctcctcgccaagcgcgacatcgcg
agcttgcgcaagctctgcggcgtcgacgacgaggacatcgccgacatgatcgacgagctc
cgccggctcagtcccaagccgggcatgaagttcgggtcggcgcggctgcagacgatggta
cccgacgtctatgtccgtccggctcctgatggcggctggcatgtcgagctcaacagcgac
accttgccgcgcgtgctggtcaaccagacctattattccaagctgtcgaagaagatcggc
aaggacgtcgataagtcctacttcaacgacgcgctgcagaacgcgacctggctggtgcgc
gcgctcgaccagcgcgcccgcaccatcctgaaagttgcgaccgagatcgtgcgtcagcag
gacggcttctttacccttggtgttgcgcatttgcggccgctgaatctaaaggccgttgcc
gaggccatccagatgcatgaatccacggtgtcgcgcgtcaccgccaacaaatacatggca
acaaatcgcggcacattcgagttgaaatatttcttcacggcatcgatcccttcggcggat
ggcggtgaggcgcattccgctgaagcggtgcgtcaccgcatcaagcagctgatcgaatcc
gaagagccgtcagcggttctgtccgatgacgcgatcgttgagcgcctgcgagtctcgggc
attgatattgcccgccgcacggtcgcgaagtaccgcgaagccatgcgcattcggtcctcg
gtgcagcgccgccgcgacaatatgtggtcaacgatgaacagtagagcatcgggcggaact
ggcctcgataaataa
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