KEGG   Bradyrhizobium barranii subsp. barranii: J4G43_044640
Entry
J4G43_044640      CDS       T08665                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bban  Bradyrhizobium barranii subsp. barranii
Pathway
bban02020  Two-component system
bban02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bban00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    J4G43_044640 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    J4G43_044640 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bban03021]
    J4G43_044640 (rpoN)
Transcription machinery [BR:bban03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     J4G43_044640 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: UEM17759
UniProt: A0A939MF27
LinkDB
Position
complement(9157795..9159249)
AA seq 484 aa
MALTQRLEFRQSQSLVMSPQLMQAIKLLQLSNLDLMTFVEEELECNPLLERASDDAAGAE
APTEVDQVSGDQLAEAQVRDARDGAMTTYTEWGGGGSGDEDYNLEAFVASETTLSDHLAE
QLSVAFTAPAQRMIGQYLIDIVDEAGYLPPDLGQAAERLGATQEDVEHVLAVLQEFDPPG
VCARNLRECLAIQLRELDRYDPAMQALVEHLDLLAKRDIASLRKLCGVDDEDIADMIDEL
RRLSPKPGMKFGSARLQTMVPDVYVRPAPDGGWHVELNSDTLPRVLVNQTYYSKLSKKIG
KDVDKSYFNDALQNATWLVRALDQRARTILKVATEIVRQQDGFFTLGVAHLRPLNLKAVA
EAIQMHESTVSRVTANKYMATNRGTFELKYFFTASIPSADGGEAHSAEAVRHRIKQLIES
EEPSAVLSDDAIVERLRVSGIDIARRTVAKYREAMRIRSSVQRRRDNMWSTMNSRASGGT
GLDK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcgctcacgcaaagattagagttccggcaatcccagtcgctggtcatgtcgccgcag
ctgatgcaggcgataaagctgctgcaattatctaatctcgacctcatgaccttcgtggag
gaagagctggagtgtaatccgctgctcgagcgtgccagtgacgatgcagctggggccgaa
gccccgactgaggtcgatcaggtcagcggcgatcagctggccgaggcccaagtgcgcgac
gcccgggatggcgccatgaccacctataccgaatggggtggcggcggctcgggtgacgaa
gactacaatctcgaagcgtttgtcgcgtccgagacaacattgtccgaccacctggccgaa
caactgtcggtcgcattcaccgcgccggcgcagcgcatgatcgggcagtatctgatcgat
atcgtcgacgaagccggctatctgccgccggatctcggccaggccgccgagcggctcggc
gcaacgcaggaggatgtcgagcacgttcttgccgtcctgcaggagttcgatccgcccggc
gtctgtgcgcgtaacttgcgcgagtgcctggcgatccagctccgcgagctcgatagatac
gatccggcgatgcaggccctcgtcgagcatctcgatctcctcgccaagcgcgacatcgcg
agcttgcgcaagctctgcggcgtcgacgacgaggacatcgccgacatgatcgacgagctc
cgccggctcagtcccaagccgggcatgaagttcgggtcggcgcggctgcagacgatggta
cccgacgtctatgtccgtccggctcctgatggcggctggcatgtcgagctcaacagcgac
accttgccgcgcgtgctggtcaaccagacctattattccaagctgtcgaagaagatcggc
aaggacgtcgataagtcctacttcaacgacgcgctgcagaacgcgacctggctggtgcgc
gcgctcgaccagcgcgcccgcaccatcctgaaagttgcgaccgagatcgtgcgtcagcag
gacggcttctttacccttggtgttgcgcatttgcggccgctgaatctaaaggccgttgcc
gaggccatccagatgcatgaatccacggtgtcgcgcgtcaccgccaacaaatacatggca
acaaatcgcggcacattcgagttgaaatatttcttcacggcatcgatcccttcggcggat
ggcggtgaggcgcattccgctgaagcggtgcgtcaccgcatcaagcagctgatcgaatcc
gaagagccgtcagcggttctgtccgatgacgcgatcgttgagcgcctgcgagtctcgggc
attgatattgcccgccgcacggtcgcgaagtaccgcgaagccatgcgcattcggtcctcg
gtgcagcgccgccgcgacaatatgtggtcaacgatgaacagtagagcatcgggcggaact
ggcctcgataaataa

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