Bradyrhizobium barranii subsp. barranii: J4G43_045405
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Entry
J4G43_045405 CDS
T08665
Name
(GenBank) hypothetical protein
KO
K18879
type III effector protein XopD
Organism
bban
Bradyrhizobium barranii subsp. barranii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
RickCE_cat
Motif
Other DBs
NCBI-ProteinID:
UEM11639
UniProt:
A0A939ME69
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All DBs
Position
complement(9336831..9341153)
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AA seq
1440 aa
AA seq
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MKFVSMNRGGQQTDSVDAQDASPADSSAEAAAFQRQLSEVAVLSAPVLMQVRAYQADASR
SEARPIVRASGQPYTPAPHGEGGGTTLNASALPLGHANLVFAGSGMDPVYSDDASLIEGL
GPALFKAGASERTVRRNVRCLLGLGHWLVKNGKPGIAARLSEESLVEDALEFGKQEGQAI
ATPLVHLRASQSPGGIAPIASRVELNPYSQDADLIKGYKEDAASGTANTVRKYATLLIDF
SDYLRENDKPGIAARLGDGSLDNDVSQYKEADPRGRRKAGAALAHLLRSPAGARAIELRP
HIRPVPDFEGAVRAEPSRTRAATAQHSSSGAISWPETLPANQQDLLLETMDGPSSSPPIE
TIAHHQQAADAGGSFRDLNLPRADHGVSPPHGLALDAAGSLNWRHHDDELTDKRHRNPLG
PGEQVLVINEHDIGELRSAKRQKTLSNPQGVAVERQLMQTPSHQLAASPSQMQAPMLSQN
ELIGEPLPGEDAELLARFRVDAKRRKLTPGAINNSVSGLGRFVRWVNAEHGGSVASRLRK
GTPLDEEIAAYRRLGRDPQHRITSALDVLRRLLRGGEEAEAPEPRVLGAPRRLVPHPEDA
PLIEGALSQALKHVKTAKDKGSAQKRATRLRALSAWLKGNRKESIIGRLNGSSKEQLTLD
NDVLAFQRTGGARYRPDLSHLRSYLKLIEANRELGLPGPEQPSSPAAWGDRHPGSAQDLP
STPASPSAGAWVWLGEQLHEPASPSRPPSHAKGRLEPSVDLNAPTPSELRDDAHFAPAHP
ARARSDTYAGLEPFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLEPFVDLNAPTPSE
LRDDAHFAPAHPAGARSDTYAGLEPFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLE
PFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLEPFVDLNAPTPSELRDDAHFAPAHP
ARARSDTYAGLEPFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLEPFVDLNAPTPSE
LRDDAHFAPAHPARARSDTYAGLEPFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLE
AAVNPNPRTPFELRDNAWAPAPDFRPLFAGPVPGHHQGARQPGSPQGLSPAPAFSDDEAL
AWLREELARRQMQEPASPSTGRAPSDIYGGLESLVHLDAPTPSELRDDAHFAPAPAAGAR
SGTYRGFPLVDLTAPTSSESRDDANSVRPFQSTSANAQIGALDPTVSSHGHGLVLEDTEW
LGDEHIDRDYRLQEQDLQRYYPNLAARTRFVNPLIVLNYLRSNDDGVVLTEFQRIVHDDN
GNDTADFLFLPVINADPEDPNSLGNHWSLLFVDRSDRGRPVAYHYDSYGLNNKDAEHLAG
RLDLRLEPAGMAQQRNSYDCGVFVVDGTRALVRQLEQGGQTVHLDQLVVDRQALQNRLRG
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtctcaatgaatcggggggggcaacaaacggatagcgtggacgcgcaagat
gcctctccagccgactcgtcggcagaggcggcggcctttcagcggcagctgagcgaggtc
gctgtcctgtccgctcccgtgctcatgcaggtccgcgcctatcaagcggatgcatcgcga
tctgaggcgcgacccatcgtgcgggcgagcgggcaaccatatacgccggctccgcacggt
gaaggcggtggaacgacgctgaatgcgtcggcgctgccgctcggccatgcaaatttggtt
ttcgcaggaagcggcatggatcctgtttattccgacgatgcgtctcttattgaggggctc
gggccggcactcttcaaggctggggcctccgagcgcaccgtcaggcgcaatgtacgttgt
cttctcggattggggcattggctcgtaaagaacggaaagccgggcattgctgcccggctt
tccgaagagtcgctggtcgaggatgccctggagttcggcaagcaggaggggcaggccatc
gctacgccactggttcatcttcgagcctcccaatcgccgggcggcatcgcgccgattgca
agccgggttgagctgaatccctattcccaagatgcggatctcatcaaagggtacaaggaa
gatgcagcgtcaggcaccgccaacaccgtcaggaagtatgcaactcttcttatcgatttc
agtgattacctccgtgagaacgataagcccggcattgctgctcgacttggcgacggctcg
ctggataatgatgtcagccagtataaggaggcggacccccgtggccgcagaaaagccggg
gccgcactggctcatctcctgaggtcgccggcgggtgctagagcgatcgagctccggcct
catattcgccccgttcctgatttcgaaggcgcggttcgcgctgagccgagccggacccgg
gccgcgactgcacagcacagctcgagcggagctatcagctggccggagactctgcctgcg
aaccagcaggatctgcttttggagacgatggacggacccagctcctcgccgcctatcgag
acaattgcgcaccatcaacaagcagcggatgcaggagggtcttttcgtgacttgaacttg
ccccgcgccgaccatggggtttcaccgccgcatggcctggcattggatgctgcagggtcc
ctgaactggcgccaccatgacgacgaactgacggataaacgtcacaggaacccgctcggg
ccaggcgagcaggttctcgtcatcaatgagcatgatataggggagttgagatcagcgaag
aggcagaagacgctaagcaatccgcagggcgtcgccgttgagcggcagctgatgcagacg
ccatcccatcaactggcggcgtccccatcgcagatgcaggctccgatgctgtcgcaaaac
gagctgatcggcgagccgctcccgggggaagacgcggagctcttggcgaggtttcgtgta
gacgccaagcggcgcaagctcaccccaggcgccatcaataacagtgtttccgggcttggg
agatttgttcgctgggtcaacgcagagcatggggggtccgtagcttctcggctacgaaaa
ggtacaccgctggatgaggaaattgcggcgtaccggagattgggccgtgacccccagcac
cgcattacatcggccctggatgttctccggcggctcttgcgtgggggtgaagaagccgaa
gctcccgaaccccgcgtcctcggtgccccacgtcgcctggttcctcatccagaagatgcg
cccctcatcgagggcgcgctgagccaagctctgaaacatgttaaaactgcgaaggataag
gggtctgcgcaaaagcgggcgacacgtcttcgcgcgctgagtgcgtggcttaaagggaat
cgcaaagagagcatcatcgggcgacttaacggctctagcaaggagcagttaacgctggac
aacgatgtgctggcgttccaacggaccggaggcgcaagataccgtcccgatttgtcgcat
cttcgcagctacttaaaactcatcgaggcgaaccgagagctggggctgccaggccctgag
cagccgagctcgccggccgcgtggggcgatcggcatcccggctcggcgcaggatcttccc
tcaacgccggcaagcccaagcgcgggagcttgggtttggttgggtgaacagctgcacgaa
ccagcatcaccatccaggcccccgtcacatgctaagggcaggcttgagccatctgttgat
ctgaatgcgccgacgccgtccgagttgcgcgacgatgctcattttgcgccagcgcatcct
gccagggcccgttcagacacctacgctggtcttgagccatttgttgatctgaatgcgccg
acgccgtccgagttgcgcgacgatgctcactttgcgccggcgcatcctgccagggctcgt
tcagacacctacgctggtcttgagccatttgttgatttgaatgcgccgacgccgtccgag
ttgcgcgacgatgctcactttgcgccggcgcatcctgccggggctcgttcagacacctac
gctggtcttgagccatttgttgatctgaatgcgccgacgccgtccgagttgcgcgacgat
gctcactttgcgccggcgcatcctgccagggctcgttcagacacctacgctggtcttgag
ccatttgttgatctgaatgcgccgacgccgtccgagttgcgcgacgatgctcactttgcg
ccggcgcatcctgccagggctcgttcagacacctacgctggtcttgagccatttgttgat
ctgaatgcgccgacgccgtccgagttgcgcgacgatgctcactttgcgccggcgcatcct
gccagggctcgttcagacacctacgctggtcttgagccatttgttgatctgaatgcgccg
acgccgtccgagttgcgcgacgatgctcattttgcgccagcgcatcctgccagggctcgt
tcagacacctacgctggtcttgagccatttgttgatctgaatgcgccgacgccgtccgag
ttgcgcgacgatgctcattttgcgccagcgcatcctgccagggcccgttcagacacctac
gctggtcttgagccatttgttgatctgaatgcgccgacgccgtccgagttgcgcgacgat
gctcattttgcgccagcgcatcctgccagggctcgctcagacacctacgccggtcttgag
gcagcggttaatccgaatccgcgcacaccattcgagttgcgtgacaatgcttgggccccg
gcgcctgactttcggccgctgtttgccgggccagtaccggggcatcaccagggcgctcga
cagcccggctcgccgcaggggctttctccggcgccagccttctcggatgatgaagctttg
gcgtggttgcgcgaggagctggcgcgacggcagatgcaagaaccggcctcaccatcaacc
ggcagggctccgtcagacatctacggcggtcttgagtcattggtgcatctggatgcgccc
acgccgtccgaattgcgcgacgatgctcactttgcgccggcgcccgctgccggggctcgc
tcaggcacctaccgcggttttccattggttgatctgactgcgcccacgtcgtccgaatca
cgcgacgatgctaattctgtacggccgtttcagagcacctccgctaatgctcagatcggg
gctttagatccgacagtctcgtctcacggccatgggctggtgctcgaggacacggaatgg
ctgggcgacgagcatattgacagggattaccggctccaggagcaggatttgcagaggtac
tatccaaatctcgccgcccggacgcggttcgtgaatcccctcatcgtcctaaattatctg
cgctctaacgacgatggcgtcgtgctaaccgaattccagcgcatcgtccatgatgataat
ggtaatgatacagccgacttcctgttcctgcccgtgattaatgccgatcctgaagatcct
aatagcctcggcaaccattggtcgctgctgttcgttgatcgcagcgaccgggggcggccg
gtcgcctatcactacgattcctacggactcaacaacaaggatgcagaacatctcgcaggt
aggctggacctccgcctggagccagccggcatggcccagcagcggaatagttatgattgc
ggcgtctttgtcgtggacgggacgcgggcgctggttaggcaattggagcaaggagggcag
acagtccacctggaccagctcgtcgtcgatcggcaggcactgcaaaaccgactcaggggc
tga
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