Beijerinckiaceae bacterium RH AL1: RHAL1_00023
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Entry
RHAL1_00023 CDS
T06029
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03030
DNA replication
bbar03430
Mismatch repair
bbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHAL1_00023 (dnaX)
03430 Mismatch repair
RHAL1_00023 (dnaX)
03440 Homologous recombination
RHAL1_00023 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbar03032
]
RHAL1_00023 (dnaX)
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_00023 (dnaX)
Enzymes [BR:
bbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHAL1_00023 (dnaX)
DNA replication proteins [BR:
bbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHAL1_00023 (dnaX)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHAL1_00023 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_16
AAA_30
AAA_assoc_2
AAA_19
RCF1-5-like_lid
AAA_18
RNA_helicase
TsaE
SRP54
nSTAND3
AAA_28
Rad17
AAA_24
AAA_17
DNA_pol3_a_NI
Thymidylate_kin
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
VVC53143
UniProt:
A0A5E4NRB6
LinkDB
All DBs
Position
1:complement(16914..18776)
Genome browser
AA seq
620 aa
AA seq
DB search
MSDGLLPDDAGPAEGLGKLFADQDKDLASAKAAEPYRVLARKYRPSSFDDLIGQEAMVRT
LSNAFELDRIHQAYMLTGVRGVGKTTTARILARAFNYETDSATKPTIRMPELGRHCQAII
ESRHVDVIEMDAASHTGIDDVREIIDSARYRPVMARTKIYIIDEVHMLSKQAFNGLLKTL
EEPPDHVKFLFATTEIEKVPITVRSRTQRFDLRRIEPQVMVAHLARICAKEGVLVEDEAL
AVIARAAEGSVRDALSLLDQAIALGAGAKGTLDAASLRAMLGLADRTQVIDLFEQAMKGD
MAAALTTLKALHDSGGEPGQILVDLADFVHFVTRLKLVPAAADDPGASPEERVRGKVFAS
QLSMAVLTRAWQLLLKGVQEVKDAPRPLAAADMVVVRLAYAADLPPPDEVLRRLAQGGAP
SGTGAPAPRGPSGSGPRAALAVASSAPRPAVAAPPPSPAVANAVRLHRLEDVVALAAEKR
DIQLKTALERDVRLVRFETGTIEFSLAPGASAALPQALMRKLQEWTGERWIVALSRDIGA
PTLKEQADAREKEARSEIVADPLVKSVLDAFPGARIVAVRRPDMTPEAIPDAGLAVAAEP
VDDGGEDVAFEDMIWTEDEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggccttctccctgacgatgccggccccgcggagggtctcggcaagctcttc
gccgatcaggacaaggacctggcgagcgccaaggcggccgagccctatcgcgtcctcgcc
cgcaagtaccggccgtcctccttcgacgacctgatcggccaggaggcgatggtccgcacg
ctgtcgaacgccttcgagctcgatcgcatccaccaggcctacatgctcaccggcgtgcgc
ggcgtcggcaagacgacgaccgcccgcattctcgcgcgcgccttcaactacgagaccgac
agcgcgacgaagccgacgatccgcatgcccgagctcggccgccactgccaggcaatcatc
gagagccggcatgtcgacgtgatcgagatggacgccgcctcgcacaccggcatcgacgac
gtgcgcgagatcatcgattccgcgcgctatcgcccggtgatggcgcgcaccaagatctac
atcatcgacgaggtgcacatgctctcgaagcaggccttcaacggcctcttgaagacgctc
gaggagccgccggaccacgtcaagttcctgttcgcgacgaccgagatcgagaaggtgccc
ataacggtgcgctcgcgcacccagcgcttcgatctccgccgcatcgagccgcaggtgatg
gtcgcccatctcgcccgcatctgcgccaaggagggcgtgctcgtcgaggacgaggcgctc
gccgtgatcgcccgcgccgccgagggctcggtgcgcgacgcgctgtcgctgctcgaccag
gcgatcgcgctgggcgccggcgcgaaggggacgctcgacgcggcgtctctgcgcgcgatg
ctcggcctcgccgaccgcacgcaggtcatcgacctcttcgagcaggcgatgaagggcgac
atggcggcggcgctgacgaccctgaaggcgctgcacgactccggcggcgagcctggccag
atcctcgtcgacctcgccgacttcgtgcatttcgtcacgcggctgaagctcgtgccggcc
gccgccgacgatcccggtgcctcgcctgaagagcgggtgcgcggcaaggtcttcgcgagc
cagttgtcgatggcggtgctgacgcgcgcctggcagctgctgctcaagggcgtgcaggaa
gtgaaggatgcgccgcgcccgctcgccgccgccgacatggtggtcgtgcgcttggcctac
gccgccgacctgccgccgccggacgaggtgctgcgacgcctcgcgcagggtggcgcgccg
tccggcaccggcgctccggcgccacgcgggccgtcgggcagcggcccgcgcgcggcgctc
gccgtcgcctcgagcgcaccgcgtccagccgttgccgcgccgccgccgtctccggccgtc
gcgaatgccgtgcgcctgcaccggctcgaggatgtcgtcgcgcttgccgcggagaagcgc
gacatccagctcaagaccgcgctcgagcgcgacgtgcgcctcgtccgcttcgagaccggc
acgatcgagttttctctcgcgcctggcgcctcggccgccctgccgcaagccctgatgcgc
aagctgcaggagtggaccggcgagcgctggatcgtcgcgctgtcgcgcgacatcggcgcg
ccgaccctgaaggagcaggccgatgcgcgcgagaaagaggcccgctccgagatcgtcgcc
gatcccctggtgaagagcgtgctcgacgccttccccggcgcgcgcatcgtcgccgtgcgc
cgccccgacatgacgccggaggcgatcccagatgcaggcctcgcggtcgccgccgagccc
gtcgacgacggcggcgaggacgtcgccttcgaggacatgatctggaccgaggacgaattg
tag
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