Beijerinckiaceae bacterium RH AL1: RHAL1_00053
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Entry
RHAL1_00053 CDS
T06029
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbar03016
]
RHAL1_00053 (truB)
Enzymes [BR:
bbar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RHAL1_00053 (truB)
Transfer RNA biogenesis [BR:
bbar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RHAL1_00053 (truB)
Prokaryotic type
RHAL1_00053 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
VVC53173
UniProt:
A0A5E4NRD9
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All DBs
Position
1:complement(51366..52292)
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AA seq
308 aa
AA seq
DB search
MSEPLAPKPQQPRSKRVEVNGWVVLDKPVGVTSTHAVSRLKRIYNGKKAGHAGTLDPLAS
GILPVAFGEATKTVPFVQDGEKGYRFTVTWGAETDTDDSDGTVVATSDKRPARDEIEALL
PRFIGTILQTPPAYSAIKIAGERAYDLARGGATVELRPREVTIDALEIVSSDGDSTVFET
RCGKGTYVRAIARDLGRALGCHGHVTALRRTRVGPFHEADAVPLGALETPEVAAASLRRV
EAGLSELTRILVDRSDATRLRRGQAMILRGADAPVDGQAYAACSGVVVAVGAIEGGELVP
ARVFNLPY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccccttgcaccgaagccccagcagccgcgctccaagcgcgtcgaggtcaac
ggctgggtcgtgctcgacaagcccgtcggcgtgacgtcgacgcatgccgtgtcgcgcctg
aagcgcatctacaacggcaagaaggccggccacgccggcacgctcgacccgctggcctcc
ggcatcctgcccgtcgcgttcggcgaggcgacgaagaccgtgccctttgtgcaggacggc
gagaaaggctaccgcttcaccgtcacctggggcgccgagaccgacaccgacgattccgac
ggcacagtcgtcgcgacctcggacaagcggccggcacgcgacgagatcgaggcgctgctg
ccgcgcttcatcggcaccatccttcagacgccgcccgcctattcggcgatcaagatcgcc
ggcgagcgcgcctacgacctcgcccgcggcggcgcgaccgtggagctgcgaccgcgcgag
gtgacgatcgacgccctcgagatcgtgtcgtcggacggcgacagcaccgtcttcgagacg
cgctgcggcaagggcacctacgtccgcgccatcgctcgcgacctcggccgcgcgctcggc
tgccacggccacgtgaccgcgctacgccggacgcgggtgggccccttccacgaagccgat
gccgtgccgctcggcgccctcgagacgccggaggtcgcggcagcctccttgcgacgggtc
gaggcgggcctgagcgagctgacccgcatcctggtcgaccgctccgatgcgacgcggctg
cggcgcggccaggcgatgatcctgcgcggcgccgatgcgcccgtggacgggcaggcctac
gccgcctgctcgggcgtcgtcgtagccgtcggcgcgatcgaaggcggcgagctggtaccg
gcgcgggttttcaacctgccctactga
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integrated database retrieval system
