Beijerinckiaceae bacterium RH AL1: RHAL1_00123
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Entry
RHAL1_00123 CDS
T06029
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03030
DNA replication
bbar03430
Mismatch repair
bbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHAL1_00123 (dnaQ)
03430 Mismatch repair
RHAL1_00123 (dnaQ)
03440 Homologous recombination
RHAL1_00123 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbar03032
]
RHAL1_00123 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_00123 (dnaQ)
Enzymes [BR:
bbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHAL1_00123 (dnaQ)
DNA replication proteins [BR:
bbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHAL1_00123 (dnaQ)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHAL1_00123 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
VVC53243
LinkDB
All DBs
Position
1:complement(120349..121062)
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AA seq
237 aa
AA seq
DB search
MREIVFDTETTGLDPASGHRVVEIGCVELLNGIPTGRTLHHYLDPQRDMPEEAFAVHGLS
SEFLTGKPLFADIADEFLAFTEGAKLVAHNAEFDFRFMNAELVALGHPPLALERMVDTLA
LARRRHPGAPVSLDALCQRYGIDNSRRTKHGALLDSEILAEVYAELNGGRQTALVFAGPA
TRGWGGVSTVARRPRPTPLAPALTDAEAASHAAFVAGLGDAAIWKRYVTPEAVAGAA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagatcgtcttcgacaccgagaccaccgggctcgacccagcgtccggccaccgc
gtcgtcgagatcgggtgcgtcgagcttctgaacggcatcccgaccggccgcacgctgcac
cattatctcgacccgcagcgcgacatgccggaggaggccttcgccgtccatggcctgtcg
agcgagtttttgaccggcaagccacttttcgccgacatcgccgacgagttcctggccttc
acagagggcgccaagctcgtcgcccacaacgctgagttcgatttccgcttcatgaacgcc
gagctggtggcgctcggccatccgccgctcgcgctggaacggatggtcgacactctggcg
ctggcgcggcgccgccaccccggcgcgccggtgagcctcgacgcgctttgtcagcgctac
ggcatcgacaactcccgtcgcaccaagcacggcgcgcttctggattcggagatcctcgcc
gaggtctatgccgagctgaacggcggccggcagacggccctcgtcttcgcggggccggcg
acccgcggctggggcggcgtctcgaccgtcgcccggcgtccgcgcccgacgccgctcgcg
ccggcgctgaccgacgccgaggcggcgagccatgcggcgttcgtcgccgggctcggcgac
gcggcgatctggaagcgctacgtgacgcccgaggccgtcgccggcgcggcttag
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