Beijerinckiaceae bacterium RH AL1: RHAL1_01432
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Entry
RHAL1_01432 CDS
T06029
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHAL1_01432 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbar03019
]
RHAL1_01432 (rhlE_1)
Enzymes [BR:
bbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHAL1_01432 (rhlE_1)
Messenger RNA biogenesis [BR:
bbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHAL1_01432 (rhlE_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
DUF2529
AAA_22
PRAI
Motif
Other DBs
NCBI-ProteinID:
VVC54534
LinkDB
All DBs
Position
1:complement(1477030..1478376)
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AA seq
448 aa
AA seq
DB search
MNQHTSLRFADLGLDQRLLQALEAEGYTNPTPIQAQAIPHVLEGRDLLGIAQTGTGKTAA
FALPILQRLSVERMRPERNTCRSLILSPTRELASQIAESFATYGQHYGYAITTIFGGVSI
RPQIDRVMRGVDILVATPGRLIDHLEQRTLRLDKVETFVLDEADQMLDMGFIHALRRIIP
LLPKQRQSLFFSATMPNEIGALAGDLLRDPVQVSVTPVSKTADRVDQRVIFVEASRKRHV
LADLVRSESMDRALVFTRTKHGADRVVRHLEEAGISAVAIHGNKSQNQRERALAGFKTGT
TKLLVATDIAARGIDVEAVSHVVNFDLPNIPESYVHRIGRTARAGAAGQAISLCDGEERA
FLKAIEKLTRQTIPSEDRRDAAAAAAEPKETRRPRQQQRPQQSKRPAPRGDQRRPAAGPK
PQHAKPAARPGEAPRPPRHHRRRPSQGN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccagcacacctcactccgtttcgccgacctcggcctcgaccagcgcctgctgcag
gcactcgaggcagaaggttacaccaacccaacccccatccaggcccaggccatcccgcac
gtgctcgaggggcgcgacctgctgggcatcgcccagaccggcaccggcaagaccgcggcc
ttcgcgctgccgatcctgcagcggctctcggtcgagcgaatgcgccccgagcgcaacacc
tgccgctcgttgatcctgtcgccgacgcgcgagctggccagccagatcgccgagagcttc
gcgacctacggccagcactacggctacgccatcaccacgatcttcggcggcgtctctatc
cgcccgcagatcgaccgcgtcatgcgcggcgtcgacatcctcgtcgcgacccccggccgg
ctgatcgaccacctcgagcagcgcacgctgcgcctcgacaaggttgagaccttcgtcctc
gacgaggccgaccagatgctcgacatgggcttcatccacgcgctgcgccggatcattccg
ctgctgccgaagcagcgccagagcctgttcttctcggcgaccatgccgaacgagatcggc
gcgctcgccggcgacctgctgcgcgaccccgtccaggtctcggtgacgccggtctcgaag
accgccgaccgcgtcgaccagcgcgtcatcttcgtcgaggcctcgcgcaagcggcacgtg
ctcgccgacctcgtccgctcggagagcatggaccgcgcgctggtgttcacgcgcaccaag
cacggcgccgaccgcgtcgtccgccacctcgaggaggccggcatctcggcggtcgcgatc
cacggcaacaagagccagaaccagcgcgagcgcgcgctcgccggcttcaagaccgggacg
acgaagctgctcgtcgccacggatatcgcggcgcgcggcatcgacgtcgaggcggtgagc
cacgtcgtcaacttcgacctgccgaacatcccggagtcctatgtgcaccggatcggccgc
accgcccgggccggcgctgccggccaggcgatctcgctgtgcgatggcgaggagcgcgcg
ttcctgaaggcgatcgagaagctgactcggcagaccatcccgtcggaagatcgccgcgat
gcggccgccgccgcggccgagccgaaggagacgcgacgcccgcgtcagcagcagcggccg
cagcagagcaagcgccctgccccgcgcggcgaccagcgacgccccgcggccggccccaag
ccgcagcacgccaagccggcggcccgacccggcgaggcgccgcgtccgccgcgccaccac
cgccggcgcccctcgcagggcaactag
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