Beijerinckiaceae bacterium RH AL1: RHAL1_02200
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Entry
RHAL1_02200 CDS
T06029
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHAL1_02200 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbar03021
]
RHAL1_02200 (rpoZ)
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_02200 (rpoZ)
Enzymes [BR:
bbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHAL1_02200 (rpoZ)
Transcription machinery [BR:
bbar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHAL1_02200 (rpoZ)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHAL1_02200 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PWD_link
Motif
Other DBs
NCBI-ProteinID:
VVC55284
LinkDB
All DBs
Position
1:complement(2224208..2224603)
Genome browser
AA seq
131 aa
AA seq
DB search
MARVTVEDCVDKVENRFELVLVASHRARMIASGSPLTVDRDNDKNPVVALREIADMTQQP
EDLKEDFIHSLQKQVEVDEPEAEVVPALSSAPAVSVSDAPTDVQFDRMTEEDLLRGLEGL
VPPAASDDDGE
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtcacggttgaagattgcgtcgacaaggttgagaatcgattcgagctggtg
ctcgtggccagtcatcgcgcgcggatgatcgcgtcgggctcgccgctcaccgtcgatcgc
gacaacgacaagaatccggtggtcgcgctgcgcgagatcgccgacatgacccagcagccg
gaagacctcaaggaggacttcatccactcgctgcaaaagcaggtcgaggtcgacgagccc
gaggccgaggtcgtgccggctctgtcgtcggcgcccgccgtgtcggtctccgatgcgccg
accgacgtgcagttcgaccgcatgacggaagaggacctgctgcgcggtctcgagggcctg
gtgccgccggcggcgagcgacgacgacggcgagtag
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