Beijerinckiaceae bacterium RH AL1: RHAL1_02202
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Entry
RHAL1_02202 CDS
T06029
Symbol
udgb
Name
(GenBank) Type-5 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHAL1_02202 (udgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_02202 (udgb)
Enzymes [BR:
bbar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHAL1_02202 (udgb)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHAL1_02202 (udgb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3054
Motif
Other DBs
NCBI-ProteinID:
VVC55286
UniProt:
A0A5E4NZC3
LinkDB
All DBs
Position
1:2225541..2226194
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AA seq
217 aa
AA seq
DB search
MPADEPGRDCPRCPRLVAFRNDNRAAEPAWHNAPVPSFGDDEARLLVVGLAPGLKGANRT
GRPFTGDFAGDLLYATLIATGFARGTYDKRPDDGLRLVDCAITNAVRCVPPHNKPLPAEI
ATCRPYLSARLVEMPRLAAIVALGRIAHESVLRALGVKLTAAPFGHGARHALSRADGTAI
TLFDSYHCSRYNTSTRVLTEAMFNDVFVAVRAHIDAA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcagacgagcccgggcgcgactgcccgcgatgcccgcggctcgtcgccttccgt
aacgacaaccgcgccgcagagcccgcttggcacaacgcaccggtgccgagcttcggcgat
gacgaggcaaggctcctcgtcgtcggtctcgcgcctgggctgaagggcgcaaaccgcacc
gggcgcccgttcacgggcgatttcgccggcgaccttctctacgccacgctgatcgcgacg
ggcttcgctcgcggcacctacgacaagcgccccgacgacgggctccgcctcgtcgactgc
gccatcaccaacgccgtccgctgcgtgccgccacacaataagccgctgccggccgagatc
gcgacgtgccggccctacctgtcggcgcgtctcgtcgagatgccgaggctggccgcgatc
gtcgcgctcggccggatcgcccacgagagcgtgcttcgggccctcggcgtcaagctcacc
gccgcccctttcggccacggcgcacggcacgcgctgtcgcgcgcagacggcacagcgatc
acgctgttcgattcgtaccattgctcgcgttacaacacgagcacgcgcgtcttgaccgag
gcgatgttcaacgacgtgttcgtggccgtccgcgcccatatcgacgcggcgtaa
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