Beijerinckiaceae bacterium RH AL1: RHAL1_02336
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Entry
RHAL1_02336 CDS
T06029
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RHAL1_02336 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_02336 (ku)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RHAL1_02336 (ku)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
VVC55418
UniProt:
A0A5E4NYV8
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All DBs
Position
1:2352334..2353308
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AA seq
324 aa
AA seq
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MAPRPSWKGYLKLSLVSCPVALYPASSSSEKISFHMLNGETHNRLKQQYIDSETGDVVER
DDRVKGYEVSKGDYIIVSDDELADVKIESSHTIDIEKFVPKAEIDALYFDSNYFIAPDDK
VGEEAFAVIREAMERRKMVGIARVVLFGKERMLMLEPRSKGLVGTTLRYAYEVRDAGGYF
DEIPKVEISKELLDLASHIIDTKAGKFKPDEFKDRYQDAVVELIRAKQAGRPLPTEKGAE
RPSNVVNLMDALRRSLGQDGGNGGGSSAKETKAEPSKAGGNAETKRKAETKPKATAKPAA
KTTAKRAAAKSVPAAAKRSTRKAG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgtcccagctggaaaggctacctcaagctctcgctcgtctcctgtccggtg
gcgctctatcccgcgtcgagctcgagcgagaagatctcgttccacatgctgaacggcgag
acgcacaatcggctgaagcagcagtacatcgattccgagaccggcgacgtcgtcgagcgc
gacgatcgcgtcaaaggctatgaggtctcgaagggcgactacatcatcgtctccgacgac
gagctggccgacgtgaagatcgagtcgagccacacgatcgacatcgaaaaattcgtgccg
aaggccgagatcgacgcgctctacttcgacagcaactacttcatcgccccggacgacaag
gtcggcgaggaggctttcgccgtcatccgcgaagcgatggagcggcgcaagatggtgggc
atcgcccgggtcgtgctgttcggcaaggagcggatgctgatgctcgagccgcgctcgaag
ggcctcgtcggcaccacgctgcgctacgcctacgaggtgcgtgacgccggcggctatttc
gacgagatccccaaagtcgagatctcgaaggagctgctcgacctcgcctcgcacatcatc
gacaccaaggccggcaagttcaagccggacgagttcaaggaccgctaccaggacgccgtc
gtcgagctgatccgcgcgaagcaggcgggacgcccgctgccgaccgagaagggcgccgag
cggccgagcaacgtcgtcaatctgatggatgcgctgcgccgctcgctcggccaggatggc
ggcaacggcggcggctcctccgccaaagagacgaaagccgagccgagcaaggccggcggc
aatgcggaaacgaagcgcaaggcggagaccaagcccaaggcgaccgccaagcctgcagcc
aagaccaccgccaagcgggccgccgcgaagtcggtgccggccgcggccaaacgttccacg
cgcaaagccggctga
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