Beijerinckiaceae bacterium RH AL1: RHAL1_02814
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Entry
RHAL1_02814 CDS
T06029
Name
(GenBank) RNA polymerase sigma factor RpoH (fragment)
KO
K03089
RNA polymerase sigma-32 factor
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbar03021
]
RHAL1_02814
Transcription machinery [BR:
bbar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHAL1_02814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
HTH_3
Sigma70_r4_2
HTH_10
KORA
HTH_31
HTH_11
GerE
HTH_25
Motif
Other DBs
NCBI-ProteinID:
VVC55891
UniProt:
A0A5E4P140
LinkDB
All DBs
Position
1:2853245..2853775
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AA seq
176 aa
AA seq
DB search
MRGGTSSAQKALFFNLRRLRAKLSMGGGEPRGNVVLYGEIAKALGVNSADVEMMDTRLSG
PDVSLNAPVADADNTSAPSERIEFLVDKQPLPDETVGSAIDTDRRLGWLKDALTRLSERE
YNILRERRLSEEAMTLEELGVRLGISKERVRQIESRAMEKLRMALVEKHPQAALTA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggcggcaccagctcggcacagaaggcgctgtttttcaacctgcggcggttgcgc
gccaagctctcgatgggcggcggcgagccgcgcggcaacgtcgtgctgtatggcgaaatc
gcaaaggcgctcggcgtcaactcggccgatgtcgagatgatggacacacggctgtcaggc
ccggacgtctcgctcaacgcgccggtggccgatgccgacaacacgagcgcaccctccgag
cgaatcgagtttctcgtcgacaagcagccgctcccggacgagacggtgggcagcgcgatc
gacaccgatcgccgcctcggttggctcaaggacgcgctgacacgcctctccgagcgcgag
tacaacattcttcgtgagcgccgtctgtccgaagaggcgatgacgctcgaggagcttggc
gttcgcctcggcatctccaaggagcgcgtgcgccagatcgagagccgcgccatggagaag
ttgcgcatggcgctggtcgaaaagcatccgcaggccgcgcttacggcctga
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