Beijerinckiaceae bacterium RH AL1: RHAL1_03726
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Entry
RHAL1_03726 CDS
T06029
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHAL1_03726 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbar03021
]
RHAL1_03726 (rho)
03019 Messenger RNA biogenesis [BR:
bbar03019
]
RHAL1_03726 (rho)
Transcription machinery [BR:
bbar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RHAL1_03726 (rho)
Messenger RNA biogenesis [BR:
bbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHAL1_03726 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_25
AAA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
VVC56794
LinkDB
All DBs
Position
1:complement(3750899..3752251)
Genome browser
AA seq
450 aa
AA seq
DB search
MTDIVSEDTDAQVEAPKADPAAAPAAPHPKEIKLADLKDKTPPALLAFAEEYEVENASTL
RKQELMFAILKQLASRDIEIVGEGVIEVLQDGFGFLRSADANYLAGPDDIYVSPSQIRRF
GLRTGDTVEGLIRSPKEGERYFALLKVNAINFEDPEKVRHKVHFDNLTPLYPDKRLKLEV
EDPTRKDLSPRVIDIVAPIGMGQRALIVAPPRTGKTVLLQNIAQSITANHPDCFLIVLLI
DERPEEVTDMQRSVKGEVVASTFDEPATRHVAVAEMVIEKAKRLVEHGRDVVILLDSITR
LGRAYNTTVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDE
VIFEEFKGTGNSEIILDRKVADKRTFPALDITRSGTRKEELLVPPDILKKMYVLRRILNP
MGTVDGIEFLLGKLRENPKGNASFFESMNT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatcgtctccgaagacacggacgcccaggtcgaggctcccaaggccgatccc
gcggccgcgccggccgccccccaccccaaggaaatcaagctcgccgacctgaaggacaag
acgccgccggcgttgctcgccttcgccgaggaatacgaggtcgagaacgcctccaccctg
cgcaagcaggagctgatgttcgcgatcctcaagcagctcgcctcgcgcgacatcgagatc
gtcggcgaaggcgtcatcgaggtgctgcaggacggcttcggcttcctccgctcggccgat
gccaactatctcgccggccccgacgacatctacgtttcgccctcgcagattcgccgcttc
ggcctgcgcaccggcgatacggtggaaggcctcatccgctcgccgaaggaaggcgagcgc
tacttcgcgctgctcaaggtcaacgcgatcaatttcgaggatcccgaaaaggtccgccac
aaggtccatttcgacaacctcacgccgctctaccccgacaagcgcctgaagctcgaggtc
gaggacccgacgcgcaaggacctgtcgccgcgcgtcatcgacattgtcgcgccgatcggc
atgggccagcgcgcgctgatcgtcgcgccgccgcgcaccggcaagacggtgctgctgcag
aacatcgcgcagtcgatcaccgccaaccaccccgactgcttcctcatcgtcctgctcatc
gacgagcggcccgaggaagtcaccgacatgcagcgctcggtgaagggcgaggtcgtcgcc
tcgaccttcgacgagccggcgacccgccacgtggcggtggccgagatggtcatcgagaag
gccaagcgcctggtggagcacggtcgcgacgtggtgattctgctcgactcgatcacccgc
ctcggtcgcgcctacaacacgaccgtgccgtcgtccggcaaggtgctcaccggcggtgtc
gacgccaacgcgctgcagcgcccgaagcgcttcttcggcgccgcgcgcaacatcgaggaa
ggcggctcgctcaccatcatcgccaccgcgctgatcgacaccggctcgcgcatggacgag
gtgatcttcgaagagttcaagggcaccggcaactcggagatcatcctcgaccgcaaggtg
gccgacaagcgcaccttcccggcgctcgacatcacccgctccggcacccgcaaggaagag
ctgctggtgccgccggacatcttgaagaagatgtatgtgctgcgccgcatcctcaacccg
atgggcaccgtcgacggcatcgagttcctgctcggcaagctgcgcgagaacccgaagggc
aacgcgagcttcttcgagtcgatgaacacatag
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