Beijerinckiaceae bacterium RH AL1: RHAL1_03941
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Entry
RHAL1_03941 CDS
T06029
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar00061
Fatty acid biosynthesis
bbar00071
Fatty acid degradation
bbar01100
Metabolic pathways
bbar01212
Fatty acid metabolism
bbar02024
Quorum sensing
bbar04146
Peroxisome
Module
bbar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RHAL1_03941
00071 Fatty acid degradation
RHAL1_03941
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RHAL1_03941
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHAL1_03941
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bbar01004
]
RHAL1_03941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbar04147
]
RHAL1_03941
Enzymes [BR:
bbar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RHAL1_03941
Lipid biosynthesis proteins [BR:
bbar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RHAL1_03941
Exosome [BR:
bbar04147
]
Exosomal proteins
Exosomal proteins of breast milk
RHAL1_03941
Exosomal proteins of breast cancer cells
RHAL1_03941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
VVC57005
LinkDB
All DBs
Position
1:3972323..3973858
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AA seq
511 aa
AA seq
DB search
MSRILSGDRVLERAALGERVANAAKALHAAGVAPGQSVALLLRNDFAFFEASVAAQTIGA
YATPINWHNTPDEIGYVLRDCGATVLVGHDDLLAKLGDAVPAGTIVLAVATPPELAAAYG
VPAGATLADRRDWDEWVAAAADKPTPPPAPQTGSMIYTSGTTGRPKGVKRQPTAEHEREA
RHANTERAYGLGDGNGAEAVVLMNGPMYHSAPNGYGLTAVRVGATIVLEPRFDPEEMLQL
IERHPVTHMHMVPTMFTRLLRLPEETRARYDLSSLRFVVHGAAPCPPPLKRAMIEWWAPV
INEYYGSTETGIPVWHSSEEALRKPGTVGRALPGGEVAAYNAEGRRLPPGEIGEIYMRAG
GMADFTYHGRDEERAAIGRDGLVTVGDVGFVDADGYVFLCDRKRDMIISGGVNIYPAEIE
AVLMQVAGVRDCAVFGIPDDEFGEAVCAHIEADPAAGLTRESVREALGQTLARYKLPKVV
AFADALPREDSGKIFKRKLRAPYWDGAGRSI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcatcctctccggcgatcgcgtgctcgagcgcgcggcgctcggggagcgggtc
gccaacgcggcgaaggccctgcacgccgccggcgtcgcgccgggccagtccgtcgcgcta
ctgctccgcaacgacttcgccttcttcgaggcgtccgttgcagcccaaaccatcggcgcc
tacgcgacgccgatcaactggcacaacacgccggacgagatcggctacgtgctgcgcgac
tgcggcgccacggtgctcgtcgggcacgacgacctgctcgccaagctcggcgacgcggtg
ccggcgggcacgatcgtgctcgcggtggcgacgccgccggagctcgccgccgcctacggc
gtgccggccggcgcgacgctcgcggaccgccgcgactgggacgagtgggtcgccgccgcc
gccgacaagcccacgccgccgccggcgccgcagaccggctcgatgatctacacgtccggc
accaccggccgacccaagggcgtgaagcgccagccgaccgccgagcacgagcgcgaggcg
cgccacgcgaacaccgagcgcgcctacggcctcggcgacggcaacggcgccgaggcggtc
gtgctgatgaacgggccgatgtaccattcggccccaaacggttacggcctgaccgccgtc
cgcgtcggcgcgaccatcgtgctcgagccgcgcttcgaccccgaggagatgctgcagctc
atcgagcggcatcccgtcacccacatgcacatggtgccgaccatgttcacgcggctgctg
cgcctgccggaagagacgcgcgcccgctacgatctctcgtcgctgcgcttcgtcgtgcac
ggcgccgcgccttgcccgccgccgctgaagcgcgcgatgatcgagtggtgggcccccgtc
atcaacgagtactacgggtcgaccgagaccggcatcccggtctggcattcgtcggaagaa
gcgctgcgcaagcccggcaccgtcggccgcgcgctgccgggcggcgaggtcgccgcctac
aacgccgagggccgacgcctgccgccgggcgagatcggcgaaatctacatgcgcgccggc
gggatggcggacttcacatatcacggccgcgacgaagagcgcgccgcgatcggccgcgac
gggctcgtcaccgtcggcgacgtcgggttcgtcgacgcggacggctacgtgttcctgtgc
gaccgcaagcgcgacatgatcatctccggcggcgtcaacatctaccccgccgagatcgag
gcggtgctgatgcaggtggcgggcgttcgcgactgtgccgtcttcggcatccccgacgac
gagttcggcgaggccgtctgcgcgcacatcgaggccgaccccgcggccgggctgacgcgc
gagagcgtgcgcgaggcgctgggccagacgctcgcgcgctacaagctgcccaaggtcgtc
gcgttcgccgacgcgttgccgcgcgaggactccggcaagatcttcaagcgcaagctgcgc
gcgccgtactgggacggcgcgggccgcagcatctga
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