Beijerinckiaceae bacterium RH AL1: RHAL1_04115
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Entry
RHAL1_04115 CDS
T06029
Symbol
addB
Name
(GenBank) Double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_04115 (addB)
Enzymes [BR:
bbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHAL1_04115 (addB)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RHAL1_04115 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
VVC57176
UniProt:
A0A5E4P4Q6
LinkDB
All DBs
Position
1:complement(4148958..4152062)
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AA seq
1034 aa
AA seq
DB search
MRAPNVLTISPALPFLDTFVAALRAGEVVPGFRPDGDLFALADATIYVPTRRAAAALRDT
LLRSAPGGAVLLPRILPLGALEATETELILAEPDPSAAGLPLPSAASPVWRRLQLAQLIQ
AWAKAIGGALRYVDAAGREVVDEQERFAVATSSIDAFALAGDLAGLIDEMLIEDVEWDAL
GTLDMATFDDYWRITTTFLAIAVERWPDILKTNGLVDPARRQIALVDAQARQLAEGRVAG
PVIAIGSTGTNRATARLLAAIARAAQGAVVLPGLDQDLDDPSFKLTLEQDDDGREPSHGH
PQSALARLLPILGIDRADVRALGTPEPVRAARLRLVNEALRPADTTDLWRAFRKKMPKKD
MAAALADVALIEAADEREEALCLAIALREALETPGRTAALITPDRELARRVRGELLRWNV
EVADTGGEPLASRPLGVLARLVAAAAASGLAAREMTALLGHPLAAFGRPRAEVARLARAL
EIGVLRVVQLDGRACAEIFAESREAAAEPTAHPAQKAIRDDTWEAMAVLWDEVAASLAPL
RSIEGEQAPDRWVAAHRAAILATAAPADPTETDKLDALFDALAESGSTLVFDAVGYGILF
GRLAGEMPLETTDSPHPRLAIYGLLEARLLPADVVLLGGLDETIWPPQARSDAFLNRPMR
AALGLSSPERRIGQTAHDFAQAMGHQTIVISRARKRGGSPTVASRFLLRLEALAEKVWDS
VRARGAAYVEMAHALDRPLTRPKPATRPCPRPEVALRPTRLSVTRIETLRRDPYAIFASH
VLNLAPLPQLGTAIDFSELGSRMHDALHAFAATPEARGTADARHRKLDEILRAAFAQALR
DPNFRAFLWASLQKAAEFFLSFDAVQRERAREIMTETTGRLHLTLADGSPFVLSARADRV
DLHRDGSALLVDYKTGQPPGLNEVRVGFAPQLTLEAAILRRGGFGMRHDGAIAATYVKLG
GREGGKLTELNFREEAFDDVVERHFEGAQQLLSAFRNRETGYPSRPFPKFAKTYGEYDHL
ARVREWSLAGEAEA
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgccgaatgtcctcaccatctcgcccgccctgccctttctcgacacgttcgtc
gcggcccttcgcgccggcgaggtcgtgcccggcttcaggcctgacggtgatttgttcgcg
ctcgccgacgcgacgatctacgtgccgacgcgccgcgccgcggccgccctgcgcgacacc
ttgctgcgcagtgcgccgggcggcgcggtgctgctgccccgcatcctgccgctcggcgcg
ctggaggcgaccgagaccgagctgatccttgccgagcccgacccctctgccgccggcctg
ccgctgccgtcggcggcgagccctgtgtggcgccgcctgcagctggcccagctcatccag
gcctgggcgaaggcgatcggcggcgcgctccgctacgtcgatgcggcgggccgcgaggtc
gtggacgagcaggagcgcttcgccgtcgcgacctcgtcgatcgacgctttcgcgctcgcc
ggcgatctcgcgggcctgatcgacgagatgctgatcgaggacgtcgaatgggatgcgctc
ggcacgctcgacatggcgacgttcgacgactactggcgcatcaccacgaccttcctggcg
atcgccgtcgagcgctggcctgacattttgaagacaaacggtctcgtcgatccggcgcgc
cggcagatcgcgctcgtcgacgcgcaggcgcgccagctcgccgaggggcgcgtcgccggg
ccggtcatcgcgatcgggtccaccggcaccaacagggcgaccgcgcgcctgctcgccgcg
atcgcccgcgccgcgcaaggcgccgtcgtgctgcccggcctcgaccaggatctcgacgac
ccgtccttcaagctcacgctcgagcaagacgatgacggccgcgagccgagccacggccat
ccgcagtccgcgcttgcgcggctcctgccgatcctcgggatcgatcgtgccgacgtgcgt
gccctgggcacgcccgagcctgtgcgcgccgcacgcttgcgcctcgtgaacgaggcgctg
cgccccgccgacacgaccgatctctggcgcgcgttccgcaagaagatgccgaagaaggac
atggccgcggcgctggccgatgttgcgctgatcgaggcggccgacgagcgcgaggaggcg
ctctgcctggcgatcgcgctgcgcgaggcgctcgagacgccgggccgcaccgcagcgctg
atcacgcccgatcgcgagctggcgcggcgggtgcgcggcgagcttctgcgctggaacgtc
gaggtcgccgacacgggaggcgagccgctcgccagccggccgctcggcgtgcttgcgcgt
ctcgtcgcggcggcggccgcgagcggcctcgcggcgcgcgagatgacggccctgctcggc
catccgctcgccgcgttcggtcgcccgcgcgccgaggtggcgcggctcgcccgcgcgctt
gagatcggcgtgctccgcgtcgtgcagctcgatggtcgcgcctgcgccgagatcttcgcc
gagtcgcgcgaggccgccgcggagccgaccgcgcatcccgcgcagaaggcgatccgcgac
gatacgtgggaggcgatggccgtcctgtgggacgaggtcgccgcgagcctcgccccgctg
cgctccatcgagggggagcaggcgccggatcgttgggttgcggcccatcgcgcggcgatc
ctggcgacggccgcgccggctgatccgacggagaccgacaagctcgacgcgctgttcgac
gcgctggcggagagcggatcgacgctcgtgttcgatgccgtcggctatggcattctcttc
ggccgtctcgccggcgagatgccgctggagaccaccgacagtccccacccccgcctcgca
atctacggcctgctcgaggcgcgcctgctgccggccgacgtcgtgctgctcggcggtctc
gacgagacgatctggccgccgcaggcgcgcagcgatgcgttcctcaatcgcccgatgcgc
gccgcgctggggctctcctcgccggagcgccgcatcggccagaccgcgcacgactttgcg
caggcgatggggcatcaaaccattgtgatctcgcgggcgcgcaagcgcggcggatccccg
acggtcgcctcccgcttcctgctacggctcgaagcgctcgcggagaaggtatgggactcc
gtgcgcgcccgcggtgccgcttatgtcgagatggcgcatgcgctcgaccgtccgctgacc
cgaccgaagcccgcgacgcggccctgcccgcggccggaggtcgcgctgcggccgacgagg
ctcagcgtcaccaggatcgagacgctgcggcgcgatccctatgcgatcttcgcctctcac
gtgctgaacctcgcgccgctgccgcagctcggcaccgcgatcgacttcagcgagctaggg
agccgcatgcacgacgcgctgcatgcctttgccgcaacgcccgaggcgcggggcacggcg
gacgcgcgtcaccgcaagctcgacgaaatcctgagagccgccttcgcgcaggcgctccgc
gacccgaacttccgcgccttcctctgggccagcctgcagaaggccgccgagttcttcctg
agcttcgacgccgtgcagcgagagcgcgcgcgcgagatcatgaccgagaccaccggccgg
ctccatctgacgctcgccgacggctcccccttcgtcctctcggcgcgggccgaccgcgtc
gatctgcaccgcgacggctcggcgctgctcgtcgactacaagaccggccagccgccaggc
ctcaacgaggtcagggtcggcttcgccccgcagctgacgctcgaggcggcgatcctgcgc
cgaggcggcttcggcatgcgccacgacggcgcgatcgcggcgacctacgtgaagctcggc
ggccgcgagggcggcaagctgacggagctgaacttcagggaagaggcgttcgacgacgtg
gtcgagcgccatttcgagggcgcgcagcagctgctctccgcgttccgcaaccgggagacc
ggctatccctcgcggccgtttccgaagttcgccaagacctacggggagtacgaccatctc
gcccgtgtgcgcgaatggtcgctcgccggggaggcggaggcgtga
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