Beijerinckiaceae bacterium RH AL1: RHAL1_04169
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Entry
RHAL1_04169 CDS
T06029
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Pathway
bbar03030
DNA replication
bbar03430
Mismatch repair
bbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHAL1_04169 (holA)
03430 Mismatch repair
RHAL1_04169 (holA)
03440 Homologous recombination
RHAL1_04169 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbar03032
]
RHAL1_04169 (holA)
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_04169 (holA)
Enzymes [BR:
bbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHAL1_04169 (holA)
DNA replication proteins [BR:
bbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHAL1_04169 (holA)
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHAL1_04169 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
VVC57229
UniProt:
A0A5E4P3T4
LinkDB
All DBs
Position
1:complement(4211697..4212698)
Genome browser
AA seq
333 aa
AA seq
DB search
MVAVRSSEADRVISNPPAGVFLYLVFGSDAGLIAERAKTILSRAVDDPKDGFQLVRLDGD
DVASDPLKLVDEANAVPMFGGRKAIGVEASAKSLLPAIEPLLKAPPRDCVVVVEAGALKR
DHQLRKLCESAKMALAIECYPDGPREIAQLVDSELAAVGLTIDPDAKELLLSLLGQDRLT
TRSELEKLATYAHGSGRVGIADVEAIVADASALVLDHAVDGAFGGDVTAVETTTERLFAE
NGDVNQLLGAALRHASALHRAASGGGEGSFYGARKALAQAQLRKWSEARLGRAVAVLGEA
VGRARREPRLAQAIAVRALWTVALAARGGSERA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgtccgctccagcgaggccgaccgcgtcatctcgaacccgccggcaggtgtc
tttctctatctcgttttcggctcggacgcggggctgattgccgaacgcgccaagacgatc
ctgtcgcgtgccgtcgatgacccgaaggacggcttccagctcgtgcgcctcgacggggac
gatgtcgcgtccgacccgctgaagctcgtcgacgaggccaatgccgtgccgatgttcggc
ggccgcaaggcgatcggcgtcgaggcctccgccaagtcgctgctgccggcgatcgagccg
ctgttgaaggcgcccccgcgcgactgcgtggtcgtcgtcgaggcgggcgcgctgaagcgt
gaccaccagctgcgcaagctctgcgagagcgccaagatggcgctcgccatcgagtgctat
cccgacggcccgcgcgagatcgcgcagctcgtcgactccgagctggcggccgtgggcctg
acgatcgatcccgatgccaaggagctgttgctctccctgctcggccaggaccggctcacc
acgcgctccgagctcgagaagctcgcgacctacgcgcacgggtcgggccgggtcgggatc
gccgacgtcgaggcgatcgtcgccgatgcctcggccttggtgctcgaccacgcggtcgat
ggcgccttcggcggcgatgtcaccgccgtcgagacgaccacggagcgcctgttcgccgag
aacggcgacgtcaaccagcttctcggcgcggcgctgcgccacgcgagcgcgctgcatcgc
gcagcctcaggcggcggcgagggctcgttctacggcgcgcgcaaggcgctggcgcaggcg
cagctgcgcaaatggagcgaagcgcgcctcggccgcgccgtggcggttctcggcgaggca
gtcggccgcgcccgccgcgagccgcgcctcgcgcaggcgatcgcggtgcgggctctttgg
accgtcgcgcttgcggcgagaggcggcagtgagcgcgcctga
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