Bdellovibrio bacteriovorus Tiberius: Bdt_0042
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Entry
Bdt_0042 CDS
T02356
Symbol
dapF
Name
(GenBank) hypothetical protein
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat00300
Lysine biosynthesis
bbat00470
D-Amino acid metabolism
bbat01100
Metabolic pathways
bbat01110
Biosynthesis of secondary metabolites
bbat01120
Microbial metabolism in diverse environments
bbat01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bdt_0042 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bdt_0042 (dapF)
Enzymes [BR:
bbat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Bdt_0042 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AFX99755
UniProt:
K7YJC2
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All DBs
Position
40228..41085
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AA seq
285 aa
AA seq
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MNRLLPLSITKMSGAGNTFSLIDARKGSVWADLEKTLGMTRPQFAKLVCDRVLGLSTDGF
LLIEDGSEGFDFHWDFYNNDGSTAEMCGNAARCAARFCYDTLDAKGTGILRFKTGAGLVV
AQILGNSRIRVKMPEARFIQELIELKTKSSSTEKFALVNTGVPHLVQKIHAFSDTVALKD
MAREARSHHDLQPAGANVTFFAEETAGKIRAVTFERGVEDYTLACGTGAVAAALVHSNES
KDTSVEVQMPGGSMQVTFISGDPHPLMEGDAVFVGDFKYNLEVVG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgactgctaccgctttccatcaccaagatgtccggagcgggaaatacattttca
ctgattgatgcccgcaaaggatcggtgtgggcggatctggaaaaaaccctgggcatgact
cgcccgcagtttgccaaactggtgtgtgaccgcgttctgggtctgagcaccgatggtttc
ttgctgattgaagatggcagcgaaggttttgattttcactgggatttttataacaacgac
ggctccaccgcggaaatgtgcggcaatgctgccagatgtgcggcccgtttttgctatgac
actttagatgccaaaggcacgggcatcctgcgctttaaaaccggcgcgggccttgtggtg
gcgcagattctgggtaacagccgcatccgcgtaaaaatgccggaggcgcgcttcatccag
gagttgattgaacttaaaaccaaatccagttcgacggaaaaattcgccctggtaaacacc
ggtgttccgcatctggtgcaaaagatccatgcgttttcagacaccgtggctttaaaagac
atggcccgcgaagccagatcccatcacgatctgcaacccgcaggtgccaacgtcactttc
tttgccgaggaaacagccgggaaaatcagagccgtgactttcgagcgcggggtcgaggat
tacactctggcctgtggcacgggcgctgtggcggcggctttggttcacagcaatgaaagc
aaagataccagcgtggaagtgcaaatgcccggtggatcaatgcaagtgacgttcatcagt
ggtgatccccacccgctgatggaaggtgatgcggtttttgtcggggactttaaatacaat
cttgaggtggtaggatga
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